G1775300


Basic Information

Item Value
gene id G1775300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 10972519 ~ 10973019 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2033061
GTTTTGATCAAGTCCGTTCTCCAGGACCCCTGCCTCCTGTTTTCGTTAAGATCATGTGGTTTAGAGAATTGACTTCGATGagataaacatttaaaaatgtattgttaactGAATTAAAGTACTGTGTCGCACGCACATTTCACAAATAAACTGAAATCCCCTTGCGAACACAGGACATCATTGTTATTATTTGTAACGTGTAACCCAATGTTGCCTGGACCAGATGATTGTGCCTGAATTCAGAGAATTCCAGGAATGTCCACCTACCGCCTGAAGCTCACGCTCCTCAAAGACCCGGGAGAGGATGAGGCGGCGGAGCGGCACGGTCATGATGAGGATGAAGGGGAAGGCGAGTGAGGCCACGGTCGACTTGACCACCCACAGTAGCACAATGCAGGCCAGCTGGATGATGGTGAACATGTTCATACGCCACGTCTTCACCTGTGgcccacgcacacacaaacatgtaaaTGGGGTTATACTGCTTATGCTTATGACAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2033061 True 501 lncRNA 0.47 1 10972519 10973019

Neighbor

gene id symbol gene type direction distance location
col5a2a LOC106581929 coding downstream 131987 10775267 ~ 10840532 (-)
LOC110501376 LOC106581931 coding downstream 421022 10502550 ~ 10551497 (-)
calcrla LOC106581932 coding downstream 474342 10439675 ~ 10498177 (-)
vwa8 vwa8 coding downstream 736490 10142947 ~ 10236029 (-)
slc35a5 slc35a5 coding downstream 890720 10069543 ~ 10081799 (-)
LOC110501381 NA coding upstream 4254 10977273 ~ 10984214 (-)
igfbp5 igfbp5 coding upstream 66482 11039501 ~ 11054592 (-)
tns1b LOC100286503 coding upstream 513889 11486908 ~ 11791569 (-)
LOC110501383 LOC106581884 coding upstream 843231 11816250 ~ 11819211 (-)
fkbp7 fkbp7 coding upstream 866557 11839576 ~ 11844296 (-)
G1775292 LOC106581928 non-coding downstream 6246 10966024 ~ 10966273 (-)
G1775291 NA non-coding downstream 7815 10964331 ~ 10964704 (-)
G1775286 NA non-coding downstream 15524 10956749 ~ 10956995 (-)
G1775285 LOC106581928 non-coding downstream 15867 10956422 ~ 10956652 (-)
G1775284 NA non-coding downstream 17362 10954955 ~ 10955157 (-)
G1775302 NA non-coding upstream 260 10973279 ~ 10977222 (-)
G1775312 NA non-coding upstream 15072 10988091 ~ 10988536 (-)
G1775558 NA non-coding upstream 86207 11059226 ~ 11059574 (-)
G1775605 NA non-coding upstream 156313 11129332 ~ 11129566 (-)
G1775608 NA non-coding upstream 158761 11131780 ~ 11132205 (-)
fundc1 fundc1 other downstream 1234663 9635535 ~ 9737896 (-)
rpl8 LOC106586796 other downstream 1680544 9289279 ~ 9291975 (-)
G1774133 NA other downstream 1849270 9101752 ~ 9123249 (-)
gpr161a gpr161 other downstream 1909318 9044945 ~ 9063520 (-)
LOC110502107 grk1 other downstream 2204472 8763292 ~ 8768047 (-)
G1777196 LOC100136012 other upstream 868054 11841073 ~ 11843059 (-)
G1777286 NA other upstream 1068089 12041108 ~ 12041622 (-)
G1777441 LOC106581914 other upstream 1295198 12268217 ~ 12270114 (-)
LOC110501411 LOC106581904 other upstream 1647563 12620582 ~ 12624860 (-)
G1778140 efnb2 other upstream 2195761 13168780 ~ 13172979 (-)

Expression


Co-expression Network