Gene
RNA
| Item | Value |
|---|---|
| gene id | G1775605 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 11129332 ~ 11129566 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2033376 | True | 235 | lncRNA | 0.40 | 1 | 11129332 | 11129566 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| igfbp5 | igfbp5 | coding | downstream | 74740 | 11039501 ~ 11054592 (-) |
| LOC110501381 | NA | coding | downstream | 145118 | 10977273 ~ 10984214 (-) |
| col5a2a | LOC106581929 | coding | downstream | 288800 | 10775267 ~ 10840532 (-) |
| LOC110501376 | LOC106581931 | coding | downstream | 577835 | 10502550 ~ 10551497 (-) |
| calcrla | LOC106581932 | coding | downstream | 631155 | 10439675 ~ 10498177 (-) |
| tns1b | LOC100286503 | coding | upstream | 357342 | 11486908 ~ 11791569 (-) |
| LOC110501383 | LOC106581884 | coding | upstream | 686684 | 11816250 ~ 11819211 (-) |
| fkbp7 | fkbp7 | coding | upstream | 710010 | 11839576 ~ 11844296 (-) |
| nemp2 | LOC106581926 | coding | upstream | 733939 | 11863505 ~ 11874073 (-) |
| ofd1 | ofd1 | coding | upstream | 884101 | 12013667 ~ 12025374 (-) |
| G1775558 | NA | non-coding | downstream | 69758 | 11059226 ~ 11059574 (-) |
| G1775312 | NA | non-coding | downstream | 140796 | 10988091 ~ 10988536 (-) |
| G1775302 | NA | non-coding | downstream | 152110 | 10973279 ~ 10977222 (-) |
| G1775300 | NA | non-coding | downstream | 156313 | 10972519 ~ 10973019 (-) |
| G1775292 | LOC106581928 | non-coding | downstream | 163059 | 10966024 ~ 10966273 (-) |
| G1775608 | NA | non-coding | upstream | 2214 | 11131780 ~ 11132205 (-) |
| G1775693 | NA | non-coding | upstream | 123949 | 11253515 ~ 11253731 (-) |
| G1775712 | NA | non-coding | upstream | 137376 | 11266942 ~ 11267242 (-) |
| G1775804 | NA | non-coding | upstream | 200119 | 11329685 ~ 11329974 (-) |
| G1775820 | NA | non-coding | upstream | 211015 | 11340581 ~ 11340836 (-) |
| fundc1 | fundc1 | other | downstream | 1391476 | 9635535 ~ 9737896 (-) |
| rpl8 | LOC106586796 | other | downstream | 1837357 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 2006083 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 2066131 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 2361285 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 711507 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 911542 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 1138651 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 1491016 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 2039214 | 13168780 ~ 13172979 (-) |
