G1775959


Basic Information

Item Value
gene id G1775959
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 11511965 ~ 11516413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2033737
CTGAGCCACTCTGGTTGAGGTGGATCTCAGCTGGGTTGTGGGGTTTGAGGcccagggcagagagaggggtctTCATCAGGCCTGGAGGGGAACGAGCTTGGCCTAGCAGGAAAAGAGCACAACATGACTTAGCATTTAGCATGCTTCACTACAACAGTCTTAGCAGCAAACACCTGTGCTGTTCATGTTggaactgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttagctggtTTGGGTCTATGTAAGGTATGTAACGGTGActaaccccattccgtacaaatttgCGCCACCGCagcattcaaacgaggctgcaatgaaaactaatgggactgtagcaaaTGTATTGGcatcaaaatctggggtgtgaactaaGTTTTGATTCAGCGTTGATTTTCATGGGAATGGACTAATAGTATTTGAGGTGTCACTACGTAATGTACAACTCATTCGGTGGAACTCATTCGGTGTCGTACAGCCTCTTTCCACCAGGTGTAGCCCTTCTCTAGCTATATTgtttcatttacattttagaggtgataagttggacaaaTTGGGTGACAAAAGCAGTTTCCCCACACAACATATCTCCCCCCTTTCACTATCACGCAGtaggtttcgcttccccacccgccatttttaaaaagaccagaCGGATTGCGTTTTTCAATCATGCAGAGACGGGCAGCATGGAGGTCTCGTCATTGATTTTGCTAGAAAGGGGAGAAATTGCGTTTTACAATGGATTCATGTCACAGTTgacctggaagtattacgtttttggggcggtAAAACAAGGTAAATTGTACGGAATAGCgcaatgttcaaaagtgtgttAGTTACCGTTACATGTATTCAATTGATAGGGCAATTTTTTAATTCCTGAATTCCAAGGCAGGTTGTTCATTGCTGCACATGTTCTATGCCTCATAAATAGGACTGACTGACATGTGTAGCATGGAAACATTAAGGAATGTTTTCCGGGACCTAGAATAACACTAGTCCAAGAAGAAAAAACATGCTCAACAGAGAATATTGTTGGAAAGTTATTTTTTGTCCAgaactaggcttaatctgggtccGGAAACcaaatgtgtgtgtatacatatggTACATACAGATGCTGAGCTGTCAAGACATCATAACAACAGAATGTGACACAGTGACACACGACAACATGGGTGATATCATGACGGACACAGCTAGATGTGGGAGGGGTGTGTCCATGCCTCATGCTCTGTGGGAGGACCATGCAGGTGACGTATCACACTGTGACCAGCCTCTGAGCGACACGGTCACAACAAACATGGCAGGATATAAGCAAAGGTGTGCCATGCACACAAATGTAAATAACAACAGTAACTCACTGACATATGTAGAAAAGACAAGCCTTATGTGGCTTAACAAATAAAGATGCTTGGGAGAAGTCAGTGAGtagcaaaacaacaaagtgaTGTTAAAAGGAATACACACATGACAACAGTCACATGGAGAGCAGTACCTTTGGAGAGTGAGGCTTAGTTATTTTGAAATATTTGTATAtgcgcatgtgtgtttgtgtgcgcgtccgtgtgtgtgtgcgcgcgcgcgcgcgtgtgtgtgtgaattagcGTGGGTGAATACGTGTGTTTCCTTTATATGAGTAATTTAGTGTGGATCTCAAGTCTATAAGGGGCTCTTGTGTCTTAAGAGGTACTGCTCTCCAGAGGCATGCTGGGTAAAGccgtgcgggggggggggggggggctatgatAGGCAGAAGGGGAGAGCTGGGGGTAACTTCAGGGTCGCTGAGCCTGGGCCAAGATGGCCAATGTGGTCAACAGTGGGACTAGGGACGTGCATCATCCTCCACTTACCAAAGAATCCCAATCAATTCTTTGTTCTGTGTGGCAACCTAAATGCCTTACAATGTGGTGGATCGTGTTGGGCAAATGCGTTTCATGGGAGGACACTCTAAAGGTCTAGAACTGAGAGGGGTCTGTGGATGTGCCGGTGATAGGGATCTGGGTAACCCTAAGCGCTGGTCCATCAGCTTTCCATACCCCGAATTGTAACATTACCAATGTGATGGTATGTGATGATTCCAAACTGATACAAGGCCAGGCTTGCAGGGCAACAGTCAACGACACCACTAGCTCCATAGAAAGAAAACCAACACCTCCTGTCTCGCAGtaatgtttagggttaggggctgGAACGGCAGAGATAGACAGGGACAGGCATACCCAGGGCTCCACCAGTCTATCTAAGTATCTGTTTCAGTTTCTATTCAAGACATTATGTGTAAAATGAAGTTGAAGCATATTGAAAGTGGGATGCATACTTGAGTAGTAGCATACTACTAGTAGATCCCTAAATGCTGGTAGATGCATGTAAGTGGATGCATACTTGACTAGAATCTTCTTACATGGACAGAGATATCATAAATCGTCATGGTTTAGTCAGGAAAAATAAGTACTCACTGCATACCCGCTTTGCATGGagtattttgttttttggggggggggtgtaacacCTTTGAGGGCGGTAAAAATGCTATGGACTTTTTATGGGGTGTTTTTAGGGCTTTGCCCAGGGGGAGATGAGGTAACTCGTAGCGCTGGCAACTGACATGGTATTTGAAGGGATAGTTCACTCCATAATTTGTCAAGCGCTTGAAACCACAACTCACGCTATTGTTTCTGTGTGTAGATCCAGCTCAATGCCTTAACCCAAATGAATGTGGAAGATAGGCACCGAATAAAATCCAAAAATTAAACAGTGCCCATCTTTCATATGAAATACGTGCCTACTAAATGCATCAGAAGACTGGTGGGATCCCAGGATATGTTGATCTGTAGATGGCAGCACATTCTCTAAACCCACTGAATTACTGACTGGAAGGCAGGAGAGAAGTGTGATTCTTGTCTGATAGGATGACTCAGACTTTTCTATGAGCCGACACAATTGCAAACAGTGTGGCCTCTCAGACAGTGTGGCCTCTGCAGTTATTAGGATCTATCCTGCACTTCCTACAAATCTGTCTGAATGGGTTTGAAGTGGATTTTGTCATGTGGGAAATGTAGTTTATTGCCCTACATCTAAATGGGGTAGAATACTCGGGATTAGGAGATGTAGTCTATTATTTTTtttgagaagaagaagaagaagaagaagaaaaatgttATGGTCCAAGAATTAAAACCAACCAGACAGCGCTAGACTAATGCCACCATGACGTTATTGACCATAATATCAGTTGTATAGTTTCTACACTCTGAACCTGTACATGCCTGAATAAAACATGGTATTCTCATGTCCTATAATATCCTAGAGAGTTAAACTTTTGAGGTTTTCTCGATCAAGTCACATGGTAATGTAACTCCTGGTTAATTATTCCTATAAATAACATCCTACTCCCTTCTTggataaatgtatttaaatatgaTTTATGGTAAAAGCCTATATTCCCCTGAGTTCCACAGCGCCTACAGCCAGCCAGAGGGGAGACTTACACAGGTTGAAGTAAGGGGTTTGCGGCGAGATGGGGAAGGCAGGGGTTTGGGGGAACACCTCACCACCAACAGTGGGCGTGGGGCTGACGGAGCCACCTTCCAACTCCTCAAAGGCCTCTCTGTAGCTGTGCATGTGTCTCTGATGGAAGAGAAGACaaggaaacacacacattcacgcacacgcatacacacccAATATGTTAGTATTCATTATGGTCATCCTAATCATATATCATCCTATGTGAGACACACTAGAGAAGGTTGAGGCTGTGGGCAGAGCATTCTACCTCTTTGGGCCGCCCCCCAGGATTCAGATTTAAGGTGTTGACGAACTCCGGCGAGACACAGCGAATGGGGGAGCGGACTGGGGGTTCGTAAGAGAAGTTTTCGTCGTGGCCATTGTGGCATTGTCCTTCGCTGGTGGTGCGTTGACGGGGCAGGGCCAATGTCTCGTCCAATGACATCCCATGGGACTGGACACCTGTACAGATCAAACAGGGGTCACATTTTGTCAGAACagtgttttgtaaaaaaaaaagagaaaaaaaatatcaTGCTGTATCAGTATCATGCTCTTTGAAACACAATTTTTCACTTCAAACCAGCAATGTCTTGCACAGCCTTTAAATCCACAGAAACATCAGAATAAGGAAACAGTCACAAAGTGTTCAAAAGTGAACAGTAAGAAATGGCAAAGCTGAACTTTCAACATGCTACTTGATGTTGAACACTCTAACCAGAACTTTTCTCATTAAATTCAGGCACTCTGGATTGTTTGGAGGGGAACAGTAGGGATCAATGTTCTTGTTGAATGTCACTAGATTATCAGGAACTCGCAGGTACATCAGTGAAACAGTC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2033737 True 4378 TUCP 0.44 3 11511965 11516413
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110502108 igfbp-2b2 coding upstream 492893 10997396 ~ 11019072 (+)
slc4a3 LOC106581928 coding upstream 534684 10874131 ~ 10977284 (+)
LOC110501378 LOC106581930 coding upstream 737561 10633629 ~ 10774404 (+)
LOC118943579 NA coding upstream 1173570 10332183 ~ 10343882 (+)
LOC110501373 LOC106581934 coding upstream 1181476 10322888 ~ 10330489 (+)
zgc:103759 LOC106581882 coding downstream 313053 11829466 ~ 11835341 (+)
LOC110501387 LOC106581925 coding downstream 335991 11852404 ~ 11863661 (+)
LOC110501389 LOC106581923 coding downstream 404357 11920770 ~ 11934545 (+)
LOC110501391 gpm6b coding downstream 443977 11960390 ~ 12013580 (+)
LOC110501392 trappc2 coding downstream 509063 12025476 ~ 12030798 (+)
G1775947 NA non-coding upstream 25429 11486284 ~ 11486536 (+)
G1775874 NA non-coding upstream 129165 11382442 ~ 11382800 (+)
G1775872 NA non-coding upstream 130036 11381727 ~ 11381929 (+)
G1775870 NA non-coding upstream 132199 11379389 ~ 11379766 (+)
G1775868 NA non-coding upstream 133551 11377840 ~ 11378414 (+)
G1775971 NA non-coding downstream 15258 11531671 ~ 11531966 (+)
G1776040 NA non-coding downstream 112053 11628466 ~ 11628719 (+)
G1776041 NA non-coding downstream 112631 11629044 ~ 11629272 (+)
G1776043 NA non-coding downstream 113927 11630340 ~ 11630553 (+)
G1776057 NA non-coding downstream 134099 11650512 ~ 11650819 (+)
LOC110501352 gpr34 other upstream 2126132 9384301 ~ 9387652 (+)
G1772556 LOC106567841 other upstream 2389508 9106015 ~ 9122457 (+)
G1772554 gpr161 other upstream 2455563 9055705 ~ 9056402 (+)
LOC110501322 LOC106581983 other upstream 3104260 8358225 ~ 8410070 (+)
G1771580 NA other upstream 3744457 7767065 ~ 7767508 (+)
G1775962 LOC100286503 other downstream 4310 11520723 ~ 11522390 (+)
G1776230 NA other downstream 514868 12031281 ~ 12032340 (+)
LOC110501399 LOC106581914 other downstream 685743 12202156 ~ 12270054 (+)
G1776709 NA other downstream 1230261 12690062 ~ 12761001 (+)

Expression

G1775959 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G1775959 Expression in each Bioproject

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G1775959 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 15.
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Co-expression Network