Gene
RNA
| Item | Value |
|---|---|
| gene id | G1776983 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 11528904 ~ 11529121 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2034886 | True | 218 | lncRNA | 0.44 | 1 | 11528904 | 11529121 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| igfbp5 | igfbp5 | coding | downstream | 474312 | 11039501 ~ 11054592 (-) |
| LOC110501381 | NA | coding | downstream | 544690 | 10977273 ~ 10984214 (-) |
| col5a2a | LOC106581929 | coding | downstream | 688372 | 10775267 ~ 10840532 (-) |
| LOC110501376 | LOC106581931 | coding | downstream | 977407 | 10502550 ~ 10551497 (-) |
| calcrla | LOC106581932 | coding | downstream | 1030727 | 10439675 ~ 10498177 (-) |
| LOC110501383 | LOC106581884 | coding | upstream | 287129 | 11816250 ~ 11819211 (-) |
| fkbp7 | fkbp7 | coding | upstream | 310455 | 11839576 ~ 11844296 (-) |
| nemp2 | LOC106581926 | coding | upstream | 334384 | 11863505 ~ 11874073 (-) |
| ofd1 | ofd1 | coding | upstream | 484546 | 12013667 ~ 12025374 (-) |
| LOC110501393 | LOC106581920 | coding | upstream | 501961 | 12031082 ~ 12034892 (-) |
| G1776982 | NA | non-coding | downstream | 176 | 11528499 ~ 11528728 (-) |
| G1776897 | NA | non-coding | downstream | 136822 | 11391371 ~ 11392082 (-) |
| G1775869 | NA | non-coding | downstream | 150572 | 11377805 ~ 11378332 (-) |
| G1775820 | NA | non-coding | downstream | 188068 | 11340581 ~ 11340836 (-) |
| G1775804 | NA | non-coding | downstream | 198930 | 11329685 ~ 11329974 (-) |
| tns1b | LOC100286503 | non-coding | upstream | 13947 | 11486908 ~ 11791569 (-) |
| G1777035 | NA | non-coding | upstream | 100327 | 11629448 ~ 11629662 (-) |
| G1777053 | NA | non-coding | upstream | 125767 | 11654888 ~ 11655097 (-) |
| G1777054 | NA | non-coding | upstream | 126067 | 11655188 ~ 11655588 (-) |
| G1777058 | NA | non-coding | upstream | 130342 | 11659463 ~ 11659688 (-) |
| fundc1 | fundc1 | other | downstream | 1791048 | 9635535 ~ 9737896 (-) |
| rpl8 | LOC106586796 | other | downstream | 2236929 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 2405655 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 2465703 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 2760857 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 311952 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 511987 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 739096 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 1091461 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 1639659 | 13168780 ~ 13172979 (-) |
