Gene
RNA
| Item | Value |
|---|---|
| gene id | G1777035 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 11629448 ~ 11629662 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2034941 | True | 215 | lncRNA | 0.53 | 1 | 11629448 | 11629662 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| igfbp5 | igfbp5 | coding | downstream | 574856 | 11039501 ~ 11054592 (-) |
| LOC110501381 | NA | coding | downstream | 645234 | 10977273 ~ 10984214 (-) |
| col5a2a | LOC106581929 | coding | downstream | 788916 | 10775267 ~ 10840532 (-) |
| LOC110501376 | LOC106581931 | coding | downstream | 1077951 | 10502550 ~ 10551497 (-) |
| calcrla | LOC106581932 | coding | downstream | 1131271 | 10439675 ~ 10498177 (-) |
| LOC110501383 | LOC106581884 | coding | upstream | 186588 | 11816250 ~ 11819211 (-) |
| fkbp7 | fkbp7 | coding | upstream | 209914 | 11839576 ~ 11844296 (-) |
| nemp2 | LOC106581926 | coding | upstream | 233843 | 11863505 ~ 11874073 (-) |
| ofd1 | ofd1 | coding | upstream | 384005 | 12013667 ~ 12025374 (-) |
| LOC110501393 | LOC106581920 | coding | upstream | 401420 | 12031082 ~ 12034892 (-) |
| G1776983 | NA | non-coding | downstream | 100327 | 11528904 ~ 11529121 (-) |
| G1776982 | NA | non-coding | downstream | 100720 | 11528499 ~ 11528728 (-) |
| G1776897 | NA | non-coding | downstream | 237366 | 11391371 ~ 11392082 (-) |
| G1775869 | NA | non-coding | downstream | 251116 | 11377805 ~ 11378332 (-) |
| G1775820 | NA | non-coding | downstream | 288612 | 11340581 ~ 11340836 (-) |
| G1777053 | NA | non-coding | upstream | 25226 | 11654888 ~ 11655097 (-) |
| G1777054 | NA | non-coding | upstream | 25526 | 11655188 ~ 11655588 (-) |
| G1777058 | NA | non-coding | upstream | 29801 | 11659463 ~ 11659688 (-) |
| G1777061 | NA | non-coding | upstream | 32085 | 11661747 ~ 11662096 (-) |
| G1777070 | NA | non-coding | upstream | 45433 | 11675095 ~ 11675302 (-) |
| fundc1 | fundc1 | other | downstream | 1891592 | 9635535 ~ 9737896 (-) |
| rpl8 | LOC106586796 | other | downstream | 2337473 | 9289279 ~ 9291975 (-) |
| G1774133 | NA | other | downstream | 2506199 | 9101752 ~ 9123249 (-) |
| gpr161a | gpr161 | other | downstream | 2566247 | 9044945 ~ 9063520 (-) |
| LOC110502107 | grk1 | other | downstream | 2861401 | 8763292 ~ 8768047 (-) |
| G1777196 | LOC100136012 | other | upstream | 211411 | 11841073 ~ 11843059 (-) |
| G1777286 | NA | other | upstream | 411446 | 12041108 ~ 12041622 (-) |
| G1777441 | LOC106581914 | other | upstream | 638555 | 12268217 ~ 12270114 (-) |
| LOC110501411 | LOC106581904 | other | upstream | 990920 | 12620582 ~ 12624860 (-) |
| G1778140 | efnb2 | other | upstream | 1539118 | 13168780 ~ 13172979 (-) |
