G1776229


Basic Information

Item Value
gene id G1776229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 12014100 ~ 12014852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2034026
cctcggggctcctgtgttcTGGCTCCTCTCTCCCAGCAGGGAtCTGTACATGCGGACTCCGTCTTTGCTCCATGATCATCTTCAGGTACTTCTGGAGTGGATCTTTGTCCGAGGACGGGGCTTTCTCCTCAGGCTCTTCTGCCTCCTTCAGTTCTTCctgccctcttctctcctccttctcttcatctccccccacctcctctccatACTGCTGCACTTCTTCCAATAGCTTAGAAACAGATAGGTCTATCCATCAATGCTAAAGTCAATCCATCAATGTTAAGGTCATTATAGAAGGAGGTGAATGTGTCAATGCAACAGCCTAGAAGTTAATCCCCACCCTTTCTTTCTCCAATCTCTCCAGTTCTCTCAGCTCCTTCTCCTGGGCTTCCTCCTTTTCCCGCTGTcgtttttcttctctctctctcctctctcgctcccacctcagctcctcttcttcctcctgtcTGGCAGGTTCATCCAGCGTTTGTTGAACTTCTACAAATCAAAGTGGGTTCACTTGAGTTAAAAGAATGTGCGGAATCGGTGCTTCCTGCACAGTGGTTTTAAAAACGGGGCTACCGTATTGCAGTATAGTGGTAAGCTATCAAACATCAGGTTGGATAAAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2034026 True 631 lncRNA 0.49 2 12014100 12014852
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110501391 gpm6b coding upstream 520 11960390 ~ 12013580 (+)
LOC110501389 LOC106581923 coding upstream 79555 11920770 ~ 11934545 (+)
LOC110501387 LOC106581925 coding upstream 150439 11852404 ~ 11863661 (+)
zgc:103759 LOC106581882 coding upstream 178759 11829466 ~ 11835341 (+)
LOC110502108 igfbp-2b2 coding upstream 995028 10997396 ~ 11019072 (+)
LOC110501392 trappc2 coding downstream 10624 12025476 ~ 12030798 (+)
LOC118943633 NA coding downstream 103729 12118581 ~ 12121181 (+)
LOC110501399 LOC106581914 coding downstream 196132 12202156 ~ 12270054 (+)
LOC110501400 LOC106581913 coding downstream 273826 12288678 ~ 12347640 (+)
cog3 cog3 coding downstream 341973 12356825 ~ 12369056 (+)
G1776279 NA non-coding upstream 53832 11960008 ~ 11960268 (+)
G1776277 NA non-coding upstream 56706 11957172 ~ 11957394 (+)
G1776265 NA non-coding upstream 72423 11941424 ~ 11941677 (+)
G1776156 NA non-coding upstream 76564 11935982 ~ 11937536 (+)
G1776158 NA non-coding upstream 78254 11934748 ~ 11935846 (+)
G1776313 ofd1 non-coding downstream 2256 12017108 ~ 12017863 (+)
G1776314 NA non-coding downstream 3984 12018836 ~ 12019353 (+)
G1776315 NA non-coding downstream 4841 12019693 ~ 12020234 (+)
G1776316 NA non-coding downstream 6385 12021237 ~ 12021480 (+)
G1776317 NA non-coding downstream 7461 12022313 ~ 12023512 (+)
G1775962 LOC100286503 other upstream 491710 11520723 ~ 11522390 (+)
G1775959 NA other upstream 497687 11511965 ~ 11516413 (+)
LOC110501352 gpr34 other upstream 2628267 9384301 ~ 9387652 (+)
G1772556 LOC106567841 other upstream 2891643 9106015 ~ 9122457 (+)
G1776230 NA other downstream 16429 12031281 ~ 12032340 (+)
G1776709 NA other downstream 731822 12690062 ~ 12761001 (+)
LOC110501417 LOC106581898 other downstream 747085 12756352 ~ 12787590 (+)
G1779170 NA other downstream 2064645 14079497 ~ 14079739 (+)

Expression

G1776229 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.4.
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G1776229 Expression in each Bioproject

Bar chart with 17 bars.
G1776229 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network