Gene
RNA
| Item | Value |
|---|---|
| gene id | G1776325 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 12058486 ~ 12058775 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2034122 | True | 290 | lncRNA | 0.45 | 1 | 12058486 | 12058775 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501392 | trappc2 | coding | upstream | 27688 | 12025476 ~ 12030798 (+) |
| LOC110501391 | gpm6b | coding | upstream | 44906 | 11960390 ~ 12013580 (+) |
| LOC110501389 | LOC106581923 | coding | upstream | 123941 | 11920770 ~ 11934545 (+) |
| LOC110501387 | LOC106581925 | coding | upstream | 194825 | 11852404 ~ 11863661 (+) |
| zgc:103759 | LOC106581882 | coding | upstream | 223145 | 11829466 ~ 11835341 (+) |
| LOC118943633 | NA | coding | downstream | 59806 | 12118581 ~ 12121181 (+) |
| LOC110501399 | LOC106581914 | coding | downstream | 152209 | 12202156 ~ 12270054 (+) |
| LOC110501400 | LOC106581913 | coding | downstream | 229903 | 12288678 ~ 12347640 (+) |
| cog3 | cog3 | coding | downstream | 298050 | 12356825 ~ 12369056 (+) |
| LOC110502047 | NA | coding | downstream | 345100 | 12403875 ~ 12410259 (+) |
| G1776231 | egfl6 | non-coding | upstream | 9937 | 12048278 ~ 12048549 (+) |
| G1776232 | egfl6 | non-coding | upstream | 14964 | 12043205 ~ 12043522 (+) |
| G1776233 | NA | non-coding | upstream | 18148 | 12037842 ~ 12040338 (+) |
| G1776317 | NA | non-coding | upstream | 34974 | 12022313 ~ 12023512 (+) |
| G1776316 | NA | non-coding | upstream | 37006 | 12021237 ~ 12021480 (+) |
| G1776234 | NA | non-coding | downstream | 10 | 12058785 ~ 12059896 (+) |
| G1776329 | NA | non-coding | downstream | 4069 | 12062844 ~ 12063158 (+) |
| G1776336 | NA | non-coding | downstream | 13222 | 12071997 ~ 12072255 (+) |
| G1776226 | NA | non-coding | downstream | 45235 | 12104010 ~ 12105931 (+) |
| G1776537 | LOC106581911 | non-coding | downstream | 364247 | 12423022 ~ 12426776 (+) |
| G1776230 | NA | other | upstream | 26146 | 12031281 ~ 12032340 (+) |
| G1775962 | LOC100286503 | other | upstream | 536096 | 11520723 ~ 11522390 (+) |
| G1775959 | NA | other | upstream | 542073 | 11511965 ~ 11516413 (+) |
| LOC110501352 | gpr34 | other | upstream | 2672653 | 9384301 ~ 9387652 (+) |
| G1776709 | NA | other | downstream | 687899 | 12690062 ~ 12761001 (+) |
| LOC110501417 | LOC106581898 | other | downstream | 703162 | 12756352 ~ 12787590 (+) |
| G1779170 | NA | other | downstream | 2020722 | 14079497 ~ 14079739 (+) |
| G1779636 | NA | other | downstream | 2844020 | 14902795 ~ 14903260 (+) |
