XLOC_037084 (cryl1)


Basic Information

Item Value
gene id XLOC_037084
gene name cryl1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 21383620 ~ 21405066 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00072996
GTGAGGCGCCGTAGCTCCGCCTATTCCTCATGCACATGACAGTCTGAGGTCTGCTGATTTGGGGGCTCCTGGGAACCAACCAACCGACTGTGTTTTGACGTTTGTGAACGAGACTGCAATGAGTTCATTAAAAGAAAAGATCATCACTGTTGTCGGAAGCGGTCTGATTGGCCGCTCCTGGGCTATGGTTTTCCTGAGTGGAGGTTACAAGGTCAAACTCTATGACAACAAACCAGGACAGGCATCAGGGGCTATCGCAGAGATCAGGAAACAGCTTGAGGAGCTTCAACAAGCCAAAATGCTCAGAGGAAACCTCAGTGCCACAGAGCAGTTGAGTCGACTCAGCAGTCATGAGGACTTACAGCAGGCCTTAGATGGGGCTTTCTTTGTTCAGGAGAGTGTATTTGAAGATCTGGAAGCAAAGCAGAGCGTCTTTCATGCGGTGGAGGAGCTTGTCTCAGAAAGCGTGATCCTCAGCAGCTCCACATCCTGCCTGATGCCAAGCAATGTGTTCTCTCAAGTCCAGAACCGAACCCGCTGCATCGTATCCCATCCGGTAAACCCGCCCTACTATGTGCGTCTGGTGGAGTTGGTGCCACACCCCGAAACGCTGCCCGCTGTGATGGAGGTTGCTTACTCACTGATGACAGATGTGGGACAGGCACCTGTGCGTCTTAGGAAGGAGATAGATGGTTTTGCTTTAAACCGGGTTCAATATGCCATCATTGCTGAGTCCTGGAGGCTGGTTCAGGACGGAGTGATCTCAGTGAAGGACATCGATCTGGTGATGTCTGAGGGCCTGGGCATGCGCTACGCCTTCATAGGTCCCATTGAAACCATGCATCTCAACGCACCAGAAGGCATGGAGGAAGAAATTGGTTTGGTGCTTGGGACCACAAAAAGGGAGTCCGTGAAAACATGTTAACCTTTTGATTACCATCCACC
>TCONS_00072997
GCCGTAGCTCCGCCTATTCCTCATGCACATGACAGTCTGAGGTCTGCTGATTTGGGGGCTCCTGGGAACCAACCAACCGACTGTGTTTTGACGTTTGTGAACGAGACTGCAATGAGTTCATTAAAAGAAAAGATCATCACTGTTGTCGGAAGCGGTCTGATTGGCCGCTCCTGGGCTATGGTTTTCCTGAGTGGAGGTTACAAGGTCAAACTCTATGACAACAAACCAGGACAGGCATCAGGGGCTATCGCAGAGATCAGGAAACAGCTTGAGGAGCTTCAACAAGCCAAAATGCTCAGAGGAAACCTCAGTGCCACAGAGCAGTTGAGTCGACTCAGCAGTCATGAGGACTTACAGCAGGCCTTAGATGGGGCTTTCTTTGTTCAGGAGAGTGTATTTGAAGATCTGGAAGCAAAGCAGAGCGTCTTTCATGCGGTGGAGGAGCTTGTCTCAGAAAGCGTGATCCTCAGCAGCTCCACATCCTGCCTGATGCCAAGCAATGTGTTCTCTCAAGTCCAGAACCGAACCCGCTGCATCGTATCCCATCCGGTAAACCCGCCCTACTATGTGCGTCTGGTGGAGTTGGTGCCACACCCCGAAACGCTGCCCGCTGTGATGGAGGTTGCTTACTCACTGATGACAGATGTGGGACAGGCACCTGTGCGTCTTAGGAAGGAGATAGATGGTTTTGCTTTAAACCGGGTTCAATATGCCATCATTGCTGAGTCCTGGAGGCTGGTTCAGGACGGAGTGATCTCAGTGAAGGACATCGATCTGGTGATGTCTGAGGGCCTGGGCATGCGCTACGCCTTCATAGGTCCCATTGAAACCATGCATCTCAACGCACCAGAAGGTATGAAAGATTATCTTCAGCGCTACAGTGAGGGCATGAAGAGGGTTCTTAATACTTTTGGGCCTGTTCCAGATTTTTCTGGAGAGCCCGCAGCTAGAGTTATAAAAGAGATCTGTGAAATGATTCCTGGCGAGCAGGAGCATCTATCAGCTAGGAGAGAGAGAAGAGATCAGCTGCTGATGGGACTAGCTAAACTCAAGGAATGAGGCTagtcaataaaatgaaaatgctttgaaatcaTGGTTTGAGCCCTTGTTGTTCTTGGTTGAATATTTCAGTTTCAGTGTCTGATTACAGAAGAAAATAACTGAAGCAAAAGCTAACTTTACAAATTTCCTCAGAATGTTGCTTTAGCTATGAAATTTACCATTGCattaacagtatttttaaaaggcTTACATTTGGAATTATTACTTGTTTCATTGAAATAGCTGAAGCACCTTCTTGCTTATGGTGATTTGAAATTTACAAATAAAGGGAAAATGAAACCA
>TCONS_00072998
ATGAGTTCATTAAAAGAAAAGATCATCACTGTTGTCGGAAGCGGTCTGATTGGCCGCTCCTGGGCTATGGTTTTCCTGAGTGGAGGTTACAAGGTCAAACTCTATGACAACAAACCAGGACAGGCATCAGGGGCTATCGCAGAGATCAGGAAACAGCTTGAGGAGCTTCAACAAGCCAAAATGCTCAGAGGAAACCTCAGTGCCACAGAGCAGTTGAGTCGACTCAGCAGTCATGAGGACTTACAGCAGGCCTTAGATGGGGCTTTCTTTGTTCAGGAGAGTGTATTTGAAGATCTGGAAGCAAAGCAGAGCGTCTTTCATGCGGTGGAGGAGCTTGTCTCAGAAAGCGTGATCCTCAGCAGCTCCACATCCTGCCTGATGCCAAGCAATGTGTTCTCTCAAGTCCAGAACCGAACCCGCTGCATCGTATCCCATCCGGTAAACCCGCCCTACTATGTGCGTCTGGTGGAGTTGGTGCCACACCCCGAAACGCTGCCCGCTGTGATGGAGGTTGCTTACTCACTGATGACAGATGTGGGACAGGCACCTGTGCGTCTTAGGAAGGAGATAGATGGTTTTGCTTTAAACCGGGTTCAATATGCCATCATTGCTGAGTCCTGGAGGCTGGTTCAGGACGGAGTGATCTCAGTGAAGGACATCGATCTGGTGATGTCTGAGGGCCTGGGCATGCGCTACGCCTTCATAGGTCCCATTGAAACCATGCATCTCAACGCACCAGAAGGTATGAAAGATTATCTTCAGCGCTACAGTGAGGGCATGAAGAGGGTTCTTAATACTTTTGGGCCTGTTCCAGATTTTTCTGGAGAGCCCGCAGCTAGAGTTATAAAAGAGATCTGTGAAATGATTCCTGGCGAGCAGGAGCATCTATCAGCTAGGAGAGAGAGAAGAGATCAGCTGCTGATGGGACTAGCTAAACTCAAGGAATGAGGCTagtcaataaaatgaaaatgctttgaaatcaTGGTTTGAGCCCTTGTTGTTCTTGGTTGAATATTTCAGTTTCAGTGTCTGATTACAGAAGAAAATAACTGAAGCAAAAGCTAACTTTACAAATTTCCTCAGAATGTTGCTTTAGCTATGAAATTTACCATTGCattaacagtatttttaaaaggcTTACATTTGGAATTATTACTTGTTTCATTGAAATAGCTGAAGCACCTTCTTGCTTATGGTGATTTGAAATTTACAAATAAAGGGAAAATGAAACCATTTCAAGGAAGTCTTTAATTTGCATATTGAACCAAGTGTTAGACACAAAAAACTACATTCCTCTGTAATGactatcaaatcacttttattgtcacatcactGACTATGACTTCGAGGGAATTTTTGTGTCTGTGAGAATTACGTCAGTTCACACAATTGTAGCAGAGTAGATGTAGGGCTGATTTTTCTAGAAAAAACACACAAGTCTCTCAATTGAATGTTCATGAACTTCCTCTGTATTTACTGCACTGGCCGGGCTAATTGTAACAGACACGGGTGTAAGTTGTATCACTTGCTGAAAAAGTTAGATTACACACagtttaagtttaatttaaatacagttaatTCTACATAGCAAGctgtgtgttcatttatttatctattaaaacaagagtggtttatttatttatcttttgtatTATAGTGCTagagtataataaataattaccaTAAAAAACAGTGATACCATTACTTATTCACAAAAAAGTGGTACTTGAGGCTCGCTAAAAACTAACAATTTAACACAAcacaacattttgtttttttggtgtACACCTTGTTCAGGTAAATTGTAACaccccagcaagcatttttttatttttaaaagatgtctaatagacgtctaaacatagtcctcttggctaaaacaaggctaaatttggggtgtcagtgaaaatctaaaaaacatctaagaataggccaaaactagactagttagctcataaacagaaatgaatgactacacatataaagtcatTATTTGACAACTAGTATAGTTTTGGGCTATTCCTAAAAGTCTATTAGATTAAAAGTCCACTGagagcccaagtttagccttgttttagccaagctgtctacatttagatgtctattagacgtcaattaaatacaaaattgttACTGGGAccatgttacaactaaccctgctTGCTGTATCGTGTTTTCTTGAGGACtggcacgcacacacaaacacgcacattgTAAGAGCAAATCCAAGCATAAATTAGTTCAGTCTTTTTAATTTAAGTCTTAGTTTTAGCCTGTCTAACGTTATGGTTTTAGATTGACTTAAGAGTAAAACATTATGAAGTTGAAAACGGACGTTTTAAAGACTTCTTATGAAAATTGAAAGTGCTTTTGTAGTAGCCTATTTCTAGTATTTTGACCATTTAATCACAGTTGAACTATTGTGGTAACAATGTAGCCAagttgtttgttgtaaaaaccaCGGTTAATTTTCATCGAAGGTTACCAGAAGGCAGTGGTTTAAAAGCACATTTCCTACAGTTTATctatttaaagttaaaatatgtTTACGTTTCTTAACAAGACACGGAACGCAATACCACATGTAGACGCGAGCTGCTGAAGCTGCTCAGTGTTTTAATCTGCTGAGCGGCGCGTTCCGGAGATTTGACGCTCTCGGGTATGCCATACTCGGGCTCAAGAACCATCCAATAAACGTCGAGGCTCCTCCCGCCGTCAGGTGCACCTCTCCCCTAGAAAATAAGTGCTCACTGTCTTCAGTCAATCACTTCATCTCACTCTGAAGACCTCAGAGGCACCACACAAGTGATTTGCTCAACTTAGCTCACACTGTCGGATATATGTCATGGATTTGATCTGAATCATCGTGTAGCCTAACAG
>TCONS_00072999
ACTTCATCTCACTCTGAAGACCTCAGAGGCACCACACAAGTGATTTGCTCAACTTAGCTCACACTGTCGGATATATGTCATGGATTTGATCTGAATCATCGTGTAGCCTAACAGGAGCTGAGAGCACCAGTAGACAGGATGAGTTGGGGAGCACTTTATGCTCAGCTGGGAGGAGTGAATAAACACTCCACCAGCTTGGGGAAGATCTGGCTGTCTGTCCTCTTCATCTTCCGCATTTGCATCCTGGTCATAGCAGCAGAGACGGTCTGGGGAGACGAACAGTCAGACTTCACCTGCAACACACAACAGCCTGGTTGCAAAAACGTCTGCTATGACCACTTCTTTCCAGTCTCGCACATACGTTTCTGGTGTCTGCAGCTCATCTTTGTGTCCACACCGGCTTTACTGGTGGCTATGCATGTGGCATATCGCAAGCGCAACAtgaaaaagaaaagcattttagcCAAGCGTGGAGGTAATGGTAAAGGAGATGACCTGGAGAGCTTGAAGAACCGGCGTCTACCCATCACTGGGCCACTGTGGTGGACCTACACATCCAGCCTGTTCTTCAGACTTCTTTTCGAGGCCGGATTCATGTATGCTCTCTATTACGTCTATGATGGCTTTCAGATGGCACGCCTTGTGAAGTGTGAGCAATGGCCTTGTCccaataaagttgactgtttcaTCTCAAGGCCGACAGAGAAGACGGTCTTCACCATCTTTATGGTGGGATCTTCTGCTATTTGCATTGTGCTCAATGTGGCTGAACTGGCCTATCTGATTGTCAAAGCATTGCTCAGGTGCTCAGCCAGAGCCAAAGGGAGGCGCTCATTTGTACACCAAGAGAAAATGTCCACAGAAAAGGCGCACCTACAGAATGAAAAAAACGCAAGGTTGCTGTCATCAGCTTCGGACTCATCGAGCAATAAGACTGTTTAAGATGATCTTCAACTCCGCCATCATGGGAGATGATAACAGTAGATTTAACAGTATGTGCTTTGTAGCTCTTTTTGACAAGTAGCCCTGAGAACACATCAAAAGACACACACTTGAAAGCAGGTTTCAGCGTGGCTCTTTCCGAAGCTGAAATTCTTTCCCCTAGCCGAAAGATGATTCAGAGTTATAACACTGCATGGTCAATGAAGAAGATCTGAGGGTTGTTGagatatatttgtaatttttttacttgCTAACTGATTACAGTACTTAGGAGTGTCCAactttggtcctggagggccggtgtcctggagagtttagctccaaccctaatcaaacacacctgaaccagctaattaagctcttactagatatactagaaaatctctggcaggtgtgttgaagcaagttggagctaaactatgcaggacaccggccgtcCAGAACCGAGTTTGCACACCCCTGGGCATTAGAAAAGCGAAAGAGTGACTCCTAGTGGTCAAACAACACACACGTTCAAAGGCCGCCTTTGCACAGAATTTGTGTCCTGTTTTTGAAGGATCGTTTTTATGTTGTACAGAAATGCATCTCTATATTTGGACACTTTGCtatgtttacttaatttttaaatgcattttagtcTTTCAGTTTCCTACCAACAATTTTAGCCtggaaatgttttttgtttgtgttatttgCTTTTGGGTTTTTAATATTCTTTTGGTAAACGATTCAAATGTTTCACAACTCACAAGGTCAATCTTACATTCAACCCTACCTGGGATTTCATAGCAGCTTAAAGCAATGTGCCTTGTTACATGAATCTGCAGTATTTAATGAGCAATAATAGATATTTCAAACAAAGTTTTAGCCTTAAAGTCAATCATTAAAGCAAGCCATTAAGTATTTCTATTTGGACTACTTGGATGATGCTTGCTGAAGAGTAAGCACTACATGACATATCCCAAAAGAGTAGTGGCTCTGGAGTATGTTATTGTAATACAGTCTTATTTATTAGCCGTTAGAGTTGCAAACAGTCTGCAATCGCGTGAGAATGTTTACTTTTTTACTAGTCGCGCTTCTCTTTGACATCTAGTCAGGATACCTGTTGACAGATGAGAGCGCATTCAGTGACAGAAGTTGGGAATGATGCGTACCTAAATGTCCACATGGTATTGGTTGAATCTTGTTTCCCAAAGCAAGCTGTGatctttttttattgtcaacTGATTGCCAGCGTAATACATGTTCTTTGCGATTTTGGCTAACAACTAATATTTTATATGAAGGTCTTAATAAAAAATCTCTAAAAA
>TCONS_00073000
atgaatgaagtttgccTGTTTGCTGCGTTGGTGCTGTATCAATTTCCTCTCTTTCTTTTCAAACAGGAGCTGAGAGCACCAGTAGACAGGATGAGTTGGGGAGCACTTTATGCTCAGCTGGGAGGAGTGAATAAACACTCCACCAGCTTGGGGAAGATCTGGCTGTCTGTCCTCTTCATCTTCCGCATTTGCATCCTGGTCATAGCAGCAGAGACGGTCTGGGGAGACGAACAGTCAGACTTCACCTGCAACACACAACAGCCTGGTTGCAAAAACGTCTGCTATGACCACTTCTTTCCAGTCTCGCACATACGTTTCTGGTGTCTGCAGCTCATCTTTGTGTCCACACCGGCTTTACTGGTGGCTATGCATGTGGCATATCGCAAGCGCAACAtgaaaaagaaaagcattttagcCAAGCGTGGAGGTAATGGTAAAGGAGATGACCTGGAGAGCTTGAAGAACCGGCGTCTACCCATCACTGGGCCACTGTGGTGGACCTACACATCCAGCCTGTTCTTCAGACTTCTTTTCGAGGCCGGATTCATGTATGCTCTCTATTACGTCTATGATGGCTTTCAGATGGCACGCCTTGTGAAGTGTGAGCAATGGCCTTGTCccaataaagttgactgtttcaTCTCAAGGCCGACAGAGAAGACGGTCTTCACCATCTTTATGGTGGGATCTTCTGCTATTTGCATTGTGCTCAATGTGGCTGAACTGGCCTATCTGATTGTCAAAGCATTGCTCAGGTGCTCAGCCAGAGCCAAAGGGAGGCGCTCATTTGTACACCAAGAGAAAATGTCCACAGAAAAGGCGCACCTACAGAATGAAAAAAACGCAAGGTTGCTGTCATCAGCTTCGGACTCATCGAGCAATAAGACTGTTTAA

Function

symbol description
cryl1 Predicted to enable L-gulonate 3-dehydrogenase activity. Predicted to act upstream of or within fatty acid metabolic process. Orthologous to human CRYL1 (crystallin lambda 1).

GO:

id name namespace
GO:0006631 fatty acid metabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005575 cellular_component cellular_component
GO:0050104 L-gulonate 3-dehydrogenase activity molecular_function
GO:0016491 oxidoreductase activity molecular_function
GO:0070403 NAD+ binding molecular_function
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor molecular_function
GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity molecular_function

KEGG:

id description
ko00040 Pentose and glucuronate interconversions

ZFIN:

id description
ZDB-GENE-060810-7 Predicted to enable L-gulonate 3-dehydrogenase activity. Predicted to act upstream of or within fatty acid metabolic process. Orthologous to human CRYL1 (crystallin lambda 1).

Ensembl:

ensembl_id ENSDARG00000003675 ENSDARG00000042707

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00072996 False 945 mRNA 0.51 7 21383620 21397772
TCONS_00072997 False 1344 mRNA 0.46 8 21383627 21399655
TCONS_00072998 False 2880 mRNA 0.40 8 21383738 21401302
TCONS_00072999 False 2252 mRNA 0.42 2 21401189 21405066
TCONS_00073000 True 894 mRNA 0.48 1 21402863 21403756

Neighbor

gene id symbol gene type direction distance location
XLOC_037083 eef1akmt1 coding upstream 20119 21358941 ~ 21363501 (+)
XLOC_037082 xpo4 coding upstream 25779 21306902 ~ 21357841 (+)
XLOC_037081 lats2 coding upstream 84284 21277846 ~ 21299336 (+)
XLOC_037080 ska3 coding upstream 108956 21259657 ~ 21274664 (+)
XLOC_037079 hcn5 coding upstream 126104 21243335 ~ 21257516 (+)
XLOC_037085 gja3 coding downstream 2921 21407987 ~ 21409466 (+)
XLOC_037086 BX649266.2 coding downstream 90807 21495873 ~ 21496699 (+)
XLOC_037087 arhgef7a coding downstream 130819 21535885 ~ 21755910 (+)
XLOC_037088 sox1a coding downstream 317667 21722733 ~ 21724661 (+)
XLOC_037089 NA coding downstream 356630 21761696 ~ 21765735 (+)
XLOC_037078 pla1a non-coding upstream 157488 21214940 ~ 21226132 (+)
XLOC_037077 NA non-coding upstream 178148 21202272 ~ 21205472 (+)
XLOC_037067 CR456628.1 non-coding upstream 947105 20433812 ~ 20436515 (+)
XLOC_037066 CR456628.2 non-coding upstream 991586 20386745 ~ 20392034 (+)
XLOC_037065 CR933734.2 non-coding upstream 1542565 19837383 ~ 19841055 (+)
XLOC_037095 CR536604.1 non-coding downstream 579043 21984109 ~ 21985996 (+)
XLOC_037104 NA non-coding downstream 907667 22312733 ~ 22313617 (+)
XLOC_037108 BX548053.3 non-coding downstream 1171879 22576945 ~ 22577059 (+)

Expression


Co-expression Network