XLOC_037086 (BX649266.2)


Basic Information

Item Value
gene id XLOC_037086
gene name BX649266.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 21495873 ~ 21496699 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073002
CTCCATTCTCAGCctatgacaaacacacacaaagaataCAGGTGGTTGGTCAGAGTGGTTCAGATGCTTCATTGATGACTTTTCTTTTGCCTTTCCCGATGACACAGATGAAGACGAAGACTGTCTCTCTGTAAGCTCATCTGCACTCGGGACCCTACCCAGAAGACAGAGGTCTATCCTCACAACTAGTTTTTTCAGGCCTCGATGAGGGATGGTGGGGGACTTTTCAGTCCGGCCAAAAGGAACGAGTGTATAGAGTTTGTGTCTCCCCCGACTGTGTTTTTCTGTTTCAGGGGTACTTAAGCAGGACCTCTCGGGGTGACTACTTGAGCCTGAATTTTGTTTCTCATGCCTGCTCTTTgatacagtttttttgtttgatgTTGAATCTGCAGGGACTTTCGCAATGTTCCTGGGTGGACTAGACTCAGAGTCTGATTCAGAGGAAGATGATGAGGATGAAAAGGAAGATGAGGATGAAGAAGATAATGGATGGGTGGGCTTGACGACAGGAGTAGGGGTAGGTGGAGAGAGTGGAGGAGAAGGGCTAGAGTCTGTCACATAAGGACGTGAGGAAACGTCTCCGTTACTCCACCGTCTCTTCTTCCTCCTCTGCTCCTCAAGGTTGGGTCCATTGCATTCCCTTTGTGTGTGATGCTGGCTTGTGTGAGGTCTTTGTTTGGGCTGAACTGCCCTCCATTCAGCTTCCGGTTCCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097900

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073002 True 716 lncRNA 0.49 2 21495873 21496699

Neighbor

gene id symbol gene type direction distance location
XLOC_037085 gja3 coding upstream 86407 21407987 ~ 21409466 (+)
XLOC_037084 cryl1 coding upstream 90807 21383620 ~ 21405066 (+)
XLOC_037083 eef1akmt1 coding upstream 132372 21358941 ~ 21363501 (+)
XLOC_037082 xpo4 coding upstream 138032 21306902 ~ 21357841 (+)
XLOC_037081 lats2 coding upstream 196537 21277846 ~ 21299336 (+)
XLOC_037087 arhgef7a coding downstream 39186 21535885 ~ 21755910 (+)
XLOC_037088 sox1a coding downstream 226034 21722733 ~ 21724661 (+)
XLOC_037089 NA coding downstream 264997 21761696 ~ 21765735 (+)
XLOC_037090 rev1 coding downstream 296866 21793565 ~ 21816606 (+)
XLOC_037091 txndc9 coding downstream 322383 21819082 ~ 21824647 (+)
XLOC_037078 pla1a non-coding upstream 269741 21214940 ~ 21226132 (+)
XLOC_037077 NA non-coding upstream 290401 21202272 ~ 21205472 (+)
XLOC_037067 CR456628.1 non-coding upstream 1059358 20433812 ~ 20436515 (+)
XLOC_037066 CR456628.2 non-coding upstream 1103839 20386745 ~ 20392034 (+)
XLOC_037065 CR933734.2 non-coding upstream 1654818 19837383 ~ 19841055 (+)
XLOC_037095 CR536604.1 non-coding downstream 487410 21984109 ~ 21985996 (+)
XLOC_037104 NA non-coding downstream 816034 22312733 ~ 22313617 (+)
XLOC_037108 BX548053.3 non-coding downstream 1080246 22576945 ~ 22577059 (+)
XLOC_037110 NA non-coding downstream 1145687 22642386 ~ 22642685 (+)

Expression


Co-expression Network