G1777785


Basic Information

Item Value
gene id G1777785
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 12827037 ~ 12829877 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2035746
AGATTATGTGACTATTTACTCCTCATCTGTCGTTAAATTTGAACAGAGGAAGTCAATGACCAAGAACAGAGAACTACTACAAAACGCTTGATGAATCGGTACCCCGTAACACTTCCCCTTTTCACAAATTGAAAGTGGTTCTTTTTGGGGGGTATAATAGCATATATATAACCCATTGAAACACTTCATAATGACCTTTCATTCACTGGTTGTAGCTCATTCACATCCAGATCGACAGATTCATGTCATTAGCATTGGATGCTTAGAAGACGACATGAAAATTTCAGATAAGTCAAAAGTCATCTGTGTTTACTTCTCTTGGAAGTCAAGAACCAACCAATCACGCTGCATCTGTCAATGCTACTCTAAAACTACTTTTTCCATAAGGATTTCACACCTAAATTTCCTTCTGTTAATTTTAGCTACATTGGGgactgagttttttttttaaatcaacttcCTCCAGCTAGAGGAAGTTGATTTCAGCCCGTATCTGGTCAACTACTCACCACCAGACAAAAACATTATCTCCAGCTACCGAGCTCCAGTTTACAGACCTCGATCAGCCATATTCATCCACCTCTACTAACACTCAACACTGACCTGACGCCAAATCCTTATAATAATGCCTTCCAAATTTGTTCCCTTCCTAAAAATACATAGCTAGCACAGCCCTGGTGCTTCAGATTGACATGTATTTTTAAACAGGTGAAGAGGGTGAGAACCAGGGCAGTCTTACTCACATGGCTGCTAAATGGAACAGCTATCACACAAAAAGGATGAGGTAGTCGATAGCAACACTAGAAAAAGGAGCCACCTGTCTACTACCATACATGCTTGACCCTTTTCTTCAGCTATTGGCTTGAATATTGGCGTAAATGGTTATTACGGAGCTGATATGCCCCAGCATGCTTTGGGCTGGCTGATGCAAATTGCTATTGTGACATCATGCTCATACCCCTTCTTTATCTACTTAAGCATTTTTAAGATGCAGGATAGGCCCGCTATAGCACAATCTGTGGGGTAGTAGTGTGGTATACATAATAGTATTGGATTCAGATGCAGGATCTCACTGTACCTAAACTAGTACTATTTTGGATGGGAACTCGATATGTAGAAAACAGAAACATTGATTAAATGGGCGAAGGGAACTTTGCTATGATAACGACGACCGTTACAAGGTTACCTTTGTTCATATAAAGATACTTTGTCACTTTCTGAATGGAACGACAATAGAAAAAATGCTTCaaaagacTTAAAAAATGACAAATCCTGAGACAGAACGACAGCTACCCCATTTAAAACAAACAGGAACTGATCGTAGTTTGAAGCAGACAAATTTCCCATAAACGCTTCGATATAATCCAGTGCATGTGATAAAAGTGATAGATAACAGCTTGCTAAAATATAATTTAGAGCAGATCAATCAAAAAACTTTGTTCCCAGTGATAACATGTGCTCTTAGAGGTCTCCACCTGTACCCAAATACCAGACACCCGTTCCCTGGACCATCCATAATTCTAAATATCTTAGTCGAATCTAATGGTCATGGGCATGTGTCAATTTTAAGTGACTTGACCGGTGGGACCCGTACAGATCTGAACGCGACTGCTgcaggagagagaaaatgagaaattgtataatttatgctgctgctcttGCTTTTCATAATATCGGCGCGTGAAGCatgttgttgttggccaatcataagtcatcaatgcggcaataggctacagtcatagaTCCTACGTGTggcaaaagttaggagatatctaatcaatggaagatggaattcAAAGTAAAAAATGTGAAGGATAGCTACAATGACCTCGAATcaacaggtaggctgctactTAATATTTTGAATGGAGTTGTAGTTTAACTGCTTAGGATGAGAAAGAGCACGCAGCCTCAATTAGCcagtttgatgcagtcaagacaggtacTACATAATTAGTCTACTATAGCGCGAGACGGCTTGGTTGGTTGCGGTCTgtagtctctctcgctcctccaccTCATCACTCGCTCACTCACAGTAGCCACGAACACACAGCAGGCACGGCCCCTGCTAGAGCGGCACCTATCTCTCCCTCACGCTTTATCAGCTCCAGTTAATAAAGTAGccttttctgctgcttccctcactcggATCGGACCGGGTCTGGATTGATGGTCTATACGGAACGGGTCtctatattaaaaaaatatttatgcaTATCCAGTCCGGGTAGAAAATCCCCAGATCCAAACTTTTTGGATGGTGAAGGCCCTAGCTCTTACAATATATGTATTTACATAAATAAACAATCTTTGGGAGATGGTGAATCACTCGAGGGCAACACAATAATACTTCAGAGGTGCTCTGGAATATGGGGGGGATAAATATGAAAGAAATGTCATGATTACATTTGACAAAGTGTGAATTTTCCCACCGTCTATCAACATAGTGTTACGACACTGTAAAACTGTTTTAGTCAAAAGTATAAATCAAATGTCAAGTATGTGAATATGGCTGAACTTCAGGGCCCAGTTATGGATGATAAGCGGAGGAAAACAAATAGCCTATACTCGGCAGAGGCTAGTTTGACACAGTACATTACTCCAATGTCCATAGGTAGGCGTATAATGGTAATACATATGCCAATATGTAGATGAGAGCTGAGTAGTGTTAGTCAGTTGGCCTTGACTCTGGTAAAAACAACGATAGTACCCcagcgagtgagtgtgtgtgtgtgtgttggggagatGGGGTAAGGGATGTACTATGCAGAGAGCTCTAAGCCCACAAATCCTCGGTTCGTCCAAACTTGTAGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2035746 True 2818 lncRNA 0.41 2 12827037 12829877

Neighbor

gene id symbol gene type direction distance location
LOC110501418 NA coding downstream 14587 12806707 ~ 12812450 (-)
LOC110501413 LOC106581899 coding downstream 110385 12684208 ~ 12716652 (-)
LOC110501414 LOC106581900 coding downstream 143062 12648341 ~ 12683975 (-)
LOC110501412 LOC106581902 coding downstream 191000 12627375 ~ 12636037 (-)
LOC110501411 LOC106581904 coding downstream 202177 12620582 ~ 12624860 (-)
ifngr2b LOC106581880 coding upstream 161 12830038 ~ 12836513 (-)
LOC110501422 LOC106581896 coding upstream 25753 12855630 ~ 12867235 (-)
crfb5 LOC106581895 coding upstream 38642 12868519 ~ 12887935 (-)
LOC110501423 LOC106581741 coding upstream 72098 12901975 ~ 12912654 (-)
LOC110501424 i20ra coding upstream 82884 12912761 ~ 12919173 (-)
G1777781 NA non-coding downstream 38420 12788130 ~ 12788617 (-)
G1777743 NA non-coding downstream 65950 12753586 ~ 12761087 (-)
G1777741 NA non-coding downstream 66376 12752532 ~ 12760661 (-)
G1777742 NA non-coding downstream 72607 12753768 ~ 12754430 (-)
G1777848 NA non-coding upstream 89345 12919222 ~ 12919556 (-)
G1777853 NA non-coding upstream 97229 12927106 ~ 12927330 (-)
G1777861 NA non-coding upstream 102988 12932865 ~ 12933125 (-)
LOC110502048 NA non-coding upstream 105379 12928202 ~ 12935504 (-)
G1777441 LOC106581914 other downstream 556923 12268217 ~ 12270114 (-)
G1777286 NA other downstream 785415 12041108 ~ 12041622 (-)
G1777196 LOC100136012 other downstream 983978 11841073 ~ 11843059 (-)
fundc1 fundc1 other downstream 3089181 9635535 ~ 9737896 (-)
G1778140 efnb2 other upstream 338903 13168780 ~ 13172979 (-)
G1778224 NA other upstream 449403 13279280 ~ 13330495 (-)
G1781137 lrp2 other upstream 2737626 15567503 ~ 15568534 (-)
b3galt1b LOC106581793 other upstream 2855979 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 4227245 17057104 ~ 17063550 (-)

Expression


Co-expression Network