Gene
RNA
| Item | Value |
|---|---|
| gene id | G1778145 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 13113075 ~ 13113293 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2036131 | True | 219 | lncRNA | 0.47 | 1 | 13113075 | 13113293 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501426 | LOC106581739 | coding | downstream | 137230 | 12963389 ~ 12975845 (-) |
| LOC110501425 | LOC106581740 | coding | downstream | 160978 | 12942551 ~ 12952097 (-) |
| LOC110502048 | NA | coding | downstream | 177728 | 12928202 ~ 12935504 (-) |
| LOC110501424 | i20ra | coding | downstream | 193902 | 12912761 ~ 12919173 (-) |
| LOC110501423 | LOC106581741 | coding | downstream | 200421 | 12901975 ~ 12912654 (-) |
| LOC110502113 | NA | coding | upstream | 725171 | 13838464 ~ 13843329 (-) |
| nepro | nepro | coding | upstream | 1007514 | 14120807 ~ 14127458 (-) |
| tex30 | LOC106581745 | coding | upstream | 1014298 | 14127591 ~ 14131604 (-) |
| poglut2 | kdelc1 | coding | upstream | 1018866 | 14132159 ~ 14156711 (-) |
| stxbp5l | stxbp5l | coding | upstream | 1043901 | 14157194 ~ 14392227 (-) |
| G1778136 | NA | non-coding | downstream | 10499 | 13102374 ~ 13102576 (-) |
| G1778135 | NA | non-coding | downstream | 11340 | 13101406 ~ 13101735 (-) |
| G1778134 | NA | non-coding | downstream | 11823 | 13101050 ~ 13101252 (-) |
| G1778127 | NA | non-coding | downstream | 23093 | 13089636 ~ 13089982 (-) |
| G1777950 | NA | non-coding | downstream | 57981 | 13054732 ~ 13055094 (-) |
| G1778157 | NA | non-coding | upstream | 19776 | 13133069 ~ 13133481 (-) |
| G1778196 | NA | non-coding | upstream | 116765 | 13230058 ~ 13280338 (-) |
| G1778254 | NA | non-coding | upstream | 209520 | 13322813 ~ 13330358 (-) |
| G1778267 | NA | non-coding | upstream | 223221 | 13336514 ~ 13336728 (-) |
| G1778287 | NA | non-coding | upstream | 237903 | 13351196 ~ 13351483 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 488381 | 12620582 ~ 12624860 (-) |
| G1777441 | LOC106581914 | other | downstream | 842961 | 12268217 ~ 12270114 (-) |
| G1777286 | NA | other | downstream | 1071453 | 12041108 ~ 12041622 (-) |
| G1777196 | LOC100136012 | other | downstream | 1270016 | 11841073 ~ 11843059 (-) |
| fundc1 | fundc1 | other | downstream | 3375219 | 9635535 ~ 9737896 (-) |
| G1778140 | efnb2 | other | upstream | 55487 | 13168780 ~ 13172979 (-) |
| G1778224 | NA | other | upstream | 165987 | 13279280 ~ 13330495 (-) |
| G1781137 | lrp2 | other | upstream | 2454210 | 15567503 ~ 15568534 (-) |
| b3galt1b | LOC106581793 | other | upstream | 2572563 | 15684423 ~ 15825221 (-) |
| LOC110501514 | dapl1 | other | upstream | 3943829 | 17057104 ~ 17063550 (-) |
