Gene
RNA
| Item | Value |
|---|---|
| gene id | G1778358 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 13402109 ~ 13402340 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2036344 | True | 232 | lncRNA | 0.38 | 1 | 13402109 | 13402340 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501426 | LOC106581739 | coding | downstream | 426264 | 12963389 ~ 12975845 (-) |
| LOC110501425 | LOC106581740 | coding | downstream | 450012 | 12942551 ~ 12952097 (-) |
| LOC110502048 | NA | coding | downstream | 466762 | 12928202 ~ 12935504 (-) |
| LOC110501424 | i20ra | coding | downstream | 482936 | 12912761 ~ 12919173 (-) |
| LOC110501423 | LOC106581741 | coding | downstream | 489455 | 12901975 ~ 12912654 (-) |
| LOC110502113 | NA | coding | upstream | 436124 | 13838464 ~ 13843329 (-) |
| nepro | nepro | coding | upstream | 718467 | 14120807 ~ 14127458 (-) |
| tex30 | LOC106581745 | coding | upstream | 725251 | 14127591 ~ 14131604 (-) |
| poglut2 | kdelc1 | coding | upstream | 729819 | 14132159 ~ 14156711 (-) |
| stxbp5l | stxbp5l | coding | upstream | 754854 | 14157194 ~ 14392227 (-) |
| G1778326 | NA | non-coding | downstream | 25996 | 13375906 ~ 13376113 (-) |
| G1778313 | NA | non-coding | downstream | 35094 | 13366812 ~ 13367015 (-) |
| G1778311 | NA | non-coding | downstream | 35439 | 13366362 ~ 13366670 (-) |
| G1778287 | NA | non-coding | downstream | 50626 | 13351196 ~ 13351483 (-) |
| G1778267 | NA | non-coding | downstream | 65381 | 13336514 ~ 13336728 (-) |
| G1778361 | NA | non-coding | upstream | 5028 | 13407368 ~ 13407631 (-) |
| G1778365 | NA | non-coding | upstream | 8342 | 13410682 ~ 13410918 (-) |
| G1778456 | NA | non-coding | upstream | 78742 | 13481082 ~ 13481440 (-) |
| G1778474 | NA | non-coding | upstream | 99636 | 13501976 ~ 13502229 (-) |
| G1778482 | NA | non-coding | upstream | 103024 | 13505364 ~ 13505643 (-) |
| G1778224 | NA | other | downstream | 71614 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 229130 | 13168780 ~ 13172979 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 777415 | 12620582 ~ 12624860 (-) |
| G1777441 | LOC106581914 | other | downstream | 1131995 | 12268217 ~ 12270114 (-) |
| G1777286 | NA | other | downstream | 1360487 | 12041108 ~ 12041622 (-) |
| G1781137 | lrp2 | other | upstream | 2165163 | 15567503 ~ 15568534 (-) |
| b3galt1b | LOC106581793 | other | upstream | 2283516 | 15684423 ~ 15825221 (-) |
| LOC110501514 | dapl1 | other | upstream | 3654782 | 17057104 ~ 17063550 (-) |
| G1783895 | LOC106581829 | other | upstream | 4467189 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 5773227 | 19175567 ~ 19179266 (-) |
