Gene
RNA
| Item | Value |
|---|---|
| gene id | G1779688 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 13938147 ~ 13938580 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2037752 | True | 374 | lncRNA | 0.43 | 2 | 13938147 | 13938580 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502113 | NA | coding | downstream | 94818 | 13838464 ~ 13843329 (-) |
| LOC110501426 | LOC106581739 | coding | downstream | 962302 | 12963389 ~ 12975845 (-) |
| LOC110501425 | LOC106581740 | coding | downstream | 986050 | 12942551 ~ 12952097 (-) |
| LOC110502048 | NA | coding | downstream | 1002800 | 12928202 ~ 12935504 (-) |
| LOC110501424 | i20ra | coding | downstream | 1018974 | 12912761 ~ 12919173 (-) |
| nepro | nepro | coding | upstream | 182227 | 14120807 ~ 14127458 (-) |
| tex30 | LOC106581745 | coding | upstream | 189011 | 14127591 ~ 14131604 (-) |
| poglut2 | kdelc1 | coding | upstream | 193579 | 14132159 ~ 14156711 (-) |
| stxbp5l | stxbp5l | coding | upstream | 218614 | 14157194 ~ 14392227 (-) |
| gtf2e1 | gtf2e1 | coding | upstream | 504948 | 14443528 ~ 14489125 (-) |
| G1779000 | NA | non-coding | downstream | 52795 | 13885113 ~ 13885352 (-) |
| G1778649 | NA | non-coding | downstream | 306649 | 13631280 ~ 13631498 (-) |
| G1778604 | NA | non-coding | downstream | 341961 | 13595976 ~ 13596186 (-) |
| G1778482 | NA | non-coding | downstream | 432504 | 13505364 ~ 13505643 (-) |
| G1778474 | NA | non-coding | downstream | 435918 | 13501976 ~ 13502229 (-) |
| G1779798 | NA | non-coding | upstream | 140924 | 14079504 ~ 14079950 (-) |
| G1779799 | NA | non-coding | upstream | 144055 | 14082635 ~ 14082902 (-) |
| G1779807 | NA | non-coding | upstream | 168660 | 14107240 ~ 14108618 (-) |
| G1779818 | NA | non-coding | upstream | 179859 | 14118439 ~ 14118710 (-) |
| G1779863 | NA | non-coding | upstream | 260198 | 14198778 ~ 14303481 (-) |
| G1778224 | NA | other | downstream | 607652 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 765168 | 13168780 ~ 13172979 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 1313453 | 12620582 ~ 12624860 (-) |
| G1777441 | LOC106581914 | other | downstream | 1668033 | 12268217 ~ 12270114 (-) |
| G1777286 | NA | other | downstream | 1896525 | 12041108 ~ 12041622 (-) |
| G1781137 | lrp2 | other | upstream | 1628923 | 15567503 ~ 15568534 (-) |
| b3galt1b | LOC106581793 | other | upstream | 1747276 | 15684423 ~ 15825221 (-) |
| LOC110501514 | dapl1 | other | upstream | 3118542 | 17057104 ~ 17063550 (-) |
| G1783895 | LOC106581829 | other | upstream | 3930949 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 5236987 | 19175567 ~ 19179266 (-) |
