Gene
RNA
| Item | Value |
|---|---|
| gene id | G1779995 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 14419206 ~ 14419417 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2038085 | True | 212 | lncRNA | 0.48 | 1 | 14419206 | 14419417 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stxbp5l | stxbp5l | coding | downstream | 26979 | 14157194 ~ 14392227 (-) |
| poglut2 | kdelc1 | coding | downstream | 262495 | 14132159 ~ 14156711 (-) |
| tex30 | LOC106581745 | coding | downstream | 287602 | 14127591 ~ 14131604 (-) |
| nepro | nepro | coding | downstream | 291748 | 14120807 ~ 14127458 (-) |
| LOC110502113 | NA | coding | downstream | 575877 | 13838464 ~ 13843329 (-) |
| gtf2e1 | gtf2e1 | coding | upstream | 24111 | 14443528 ~ 14489125 (-) |
| LOC110501444 | scrn3 | coding | upstream | 145774 | 14565191 ~ 14570768 (-) |
| sp9 | LOC106581755 | coding | upstream | 163731 | 14583148 ~ 14588361 (-) |
| LOC110501449 | LOC106581758 | coding | upstream | 315891 | 14735308 ~ 14738738 (-) |
| LOC110501448 | LOC106581757 | coding | upstream | 324354 | 14743771 ~ 14793451 (-) |
| G1779863 | NA | non-coding | downstream | 115725 | 14198778 ~ 14303481 (-) |
| G1779894 | NA | non-coding | downstream | 167985 | 14250704 ~ 14251221 (-) |
| G1779818 | NA | non-coding | downstream | 300496 | 14118439 ~ 14118710 (-) |
| G1779807 | NA | non-coding | downstream | 310588 | 14107240 ~ 14108618 (-) |
| G1779799 | NA | non-coding | downstream | 336304 | 14082635 ~ 14082902 (-) |
| G1779996 | NA | non-coding | upstream | 2080 | 14421497 ~ 14421878 (-) |
| G1779997 | NA | non-coding | upstream | 3205 | 14422622 ~ 14422858 (-) |
| G1780050 | NA | non-coding | upstream | 111635 | 14531052 ~ 14532048 (-) |
| G1780242 | NA | non-coding | upstream | 478490 | 14897907 ~ 14898135 (-) |
| G1780243 | NA | non-coding | upstream | 481917 | 14901334 ~ 14901540 (-) |
| G1778224 | NA | other | downstream | 1088711 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 1246227 | 13168780 ~ 13172979 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 1794512 | 12620582 ~ 12624860 (-) |
| G1777441 | LOC106581914 | other | downstream | 2149092 | 12268217 ~ 12270114 (-) |
| G1777286 | NA | other | downstream | 2377584 | 12041108 ~ 12041622 (-) |
| G1781137 | lrp2 | other | upstream | 1148086 | 15567503 ~ 15568534 (-) |
| b3galt1b | LOC106581793 | other | upstream | 1266439 | 15684423 ~ 15825221 (-) |
| LOC110501514 | dapl1 | other | upstream | 2637705 | 17057104 ~ 17063550 (-) |
| G1783895 | LOC106581829 | other | upstream | 3450112 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 4756150 | 19175567 ~ 19179266 (-) |
