G1779602


Basic Information

Item Value
gene id G1779602
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 14841697 ~ 14841900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2037660
ACATTGTATAGCATCAAAACAGGATTCTATAAGGTCACAAGGCGAGACCCATATGCAGACACAgaaggcagatggttgagctccgatatttattataacacaaggggtaggcaaaaggcaggtcggatacaggcgagagttcataaaccaggtcagagtccaaacagtacaaggcgttaggcaggctcaaggtcaggggcaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2037660 True 204 lncRNA 0.48 1 14841697 14841900

Neighbor

gene id symbol gene type direction distance location
LOC110502114 NA coding upstream 124082 14711709 ~ 14717615 (+)
LOC110501446 LOC106581756 coding upstream 153586 14681021 ~ 14688111 (+)
LOC110501445 NA coding upstream 177696 14588535 ~ 14664001 (+)
cir1 cir1 coding upstream 258853 14570825 ~ 14582844 (+)
gpr155a LOC106581752 coding upstream 276175 14550585 ~ 14565522 (+)
ppp1r9ala LOC106581761 coding downstream 9910 14851810 ~ 14885188 (+)
LOC110501453 LOC106581766 coding downstream 125770 14967670 ~ 14970001 (+)
LOC110501456 LOC106581769 coding downstream 203434 15045334 ~ 15065802 (+)
mettl8 mettl8 coding downstream 262478 15104378 ~ 15117153 (+)
LOC110501461 tlk1 coding downstream 280742 15122642 ~ 15148331 (+)
G1779571 LOC106586233 non-coding upstream 40605 14800535 ~ 14801092 (+)
G1779560 NA non-coding upstream 57859 14783180 ~ 14783838 (+)
G1779534 NA non-coding upstream 100592 14740758 ~ 14741105 (+)
G1779624 NA non-coding downstream 47155 14889055 ~ 14889347 (+)
G1779625 NA non-coding downstream 48946 14890846 ~ 14891081 (+)
G1779633 NA non-coding downstream 58276 14900176 ~ 14900435 (+)
G1779637 NA non-coding downstream 61405 14903305 ~ 14903576 (+)
G1779638 LOC106581763 non-coding downstream 61830 14903730 ~ 14906856 (+)
G1779170 NA other upstream 761958 14079497 ~ 14079739 (+)
LOC110501417 LOC106581898 other upstream 2054119 12756352 ~ 12787590 (+)
G1776709 NA other upstream 2083501 12690062 ~ 12761001 (+)
LOC110501399 LOC106581914 other upstream 2591689 12202156 ~ 12270054 (+)
G1776230 NA other upstream 2809357 12031281 ~ 12032340 (+)
G1779636 NA other downstream 60895 14902795 ~ 14903260 (+)
G1780353 NA other downstream 196199 15038099 ~ 15043643 (+)
G1780491 NA other downstream 449462 15291362 ~ 15347666 (+)
G1780575 NA other downstream 582811 15424711 ~ 15433820 (+)
G1781293 LOC106586198 other downstream 997704 15839604 ~ 15848595 (+)

Expression


Co-expression Network