G1779684


Basic Information

Item Value
gene id G1779684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 14964846 ~ 14965158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2037748
gcgcccggcccgccacaggagtcgctggtgtgtgatgagacaaggatatccctaccggccaaaccctccctaacccggacgacgctgggccaattttgcattgccccacagacctcccagtTGCAGTCGGCTGCAACAGAgactgggcgcgaacccagagtctctggtggcacagctagcacagcgatgcagtgccctagaccacagcgccacctgggaggcccttCGTGCTCACTTTTTGTTCCGGCACCTCACGATTTACAAATTAAGAACTGCAACTGTTGCTGTATGCTCATGGTTTCATTTCTTCACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2037748 True 313 lncRNA 0.57 1 14964846 14965158

Neighbor

gene id symbol gene type direction distance location
ppp1r9ala LOC106581761 coding upstream 79658 14851810 ~ 14885188 (+)
LOC110502114 NA coding upstream 247231 14711709 ~ 14717615 (+)
LOC110501446 LOC106581756 coding upstream 276735 14681021 ~ 14688111 (+)
LOC110501445 NA coding upstream 300845 14588535 ~ 14664001 (+)
cir1 cir1 coding upstream 382002 14570825 ~ 14582844 (+)
LOC110501453 LOC106581766 coding downstream 2512 14967670 ~ 14970001 (+)
LOC110501456 LOC106581769 coding downstream 80176 15045334 ~ 15065802 (+)
mettl8 mettl8 coding downstream 139220 15104378 ~ 15117153 (+)
LOC110501461 tlk1 coding downstream 157484 15122642 ~ 15148331 (+)
mettl5 mettl5 coding downstream 389374 15354532 ~ 15358880 (+)
G1779680 NA non-coding upstream 9834 14954791 ~ 14955012 (+)
G1779668 NA non-coding upstream 23158 14941456 ~ 14941688 (+)
G1779638 LOC106581763 non-coding upstream 57990 14903730 ~ 14906856 (+)
G1779637 NA non-coding upstream 61270 14903305 ~ 14903576 (+)
G1779633 NA non-coding upstream 64411 14900176 ~ 14900435 (+)
G1779687 NA non-coding downstream 6004 14971162 ~ 14971388 (+)
G1780294 NA non-coding downstream 15542 14980700 ~ 14980917 (+)
G1780303 NA non-coding downstream 26387 14991545 ~ 14991797 (+)
G1780304 NA non-coding downstream 26818 14991976 ~ 14992391 (+)
G1780332 NA non-coding downstream 42475 15007633 ~ 15013018 (+)
G1779636 NA other upstream 61586 14902795 ~ 14903260 (+)
G1779170 NA other upstream 885107 14079497 ~ 14079739 (+)
LOC110501417 LOC106581898 other upstream 2177268 12756352 ~ 12787590 (+)
G1776709 NA other upstream 2206650 12690062 ~ 12761001 (+)
LOC110501399 LOC106581914 other upstream 2714838 12202156 ~ 12270054 (+)
G1780353 NA other downstream 72941 15038099 ~ 15043643 (+)
G1780491 NA other downstream 326204 15291362 ~ 15347666 (+)
G1780575 NA other downstream 459553 15424711 ~ 15433820 (+)
G1781293 LOC106586198 other downstream 874446 15839604 ~ 15848595 (+)
G1781423 LOC106581799 other downstream 1097599 16062757 ~ 16063401 (+)

Expression


Co-expression Network