Gene
RNA
| Item | Value |
|---|---|
| gene id | G1780369 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 15090764 ~ 15091937 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2038519 | True | 1174 | lncRNA | 0.43 | 1 | 15090764 | 15091937 |
15,088,400
15,088,800
15,089,200
15,089,600
15,090,000
15,090,400
15,090,800
15,091,200
15,091,600
15,091,600
15,092,000
15,092,400
15,092,800
15,093,200
15,093,600
15,094,000
15,094,400
15,094,800
NC_048586.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501456 | LOC106581769 | coding | upstream | 24962 | 15045334 ~ 15065802 (+) |
| LOC110501453 | LOC106581766 | coding | upstream | 120763 | 14967670 ~ 14970001 (+) |
| ppp1r9ala | LOC106581761 | coding | upstream | 205576 | 14851810 ~ 14885188 (+) |
| LOC110502114 | NA | coding | upstream | 373149 | 14711709 ~ 14717615 (+) |
| LOC110501446 | LOC106581756 | coding | upstream | 402653 | 14681021 ~ 14688111 (+) |
| mettl8 | mettl8 | coding | downstream | 12441 | 15104378 ~ 15117153 (+) |
| LOC110501461 | tlk1 | coding | downstream | 30705 | 15122642 ~ 15148331 (+) |
| mettl5 | mettl5 | coding | downstream | 262595 | 15354532 ~ 15358880 (+) |
| fastkd1 | fakd1 | coding | downstream | 309855 | 15401792 ~ 15415120 (+) |
| lrp2a | lrp2 | coding | downstream | 411123 | 15503060 ~ 15572970 (+) |
| G1780367 | NA | non-coding | upstream | 1145 | 15089401 ~ 15089619 (+) |
| G1780332 | NA | non-coding | upstream | 77746 | 15007633 ~ 15013018 (+) |
| G1780304 | NA | non-coding | upstream | 98373 | 14991976 ~ 14992391 (+) |
| G1780303 | NA | non-coding | upstream | 98967 | 14991545 ~ 14991797 (+) |
| G1780294 | NA | non-coding | upstream | 109847 | 14980700 ~ 14980917 (+) |
| G1780377 | NA | non-coding | downstream | 10485 | 15102422 ~ 15102721 (+) |
| G1780378 | NA | non-coding | downstream | 11417 | 15103354 ~ 15103579 (+) |
| G1780399 | NA | non-coding | downstream | 78604 | 15170541 ~ 15171671 (+) |
| G1780401 | NA | non-coding | downstream | 80295 | 15172232 ~ 15180278 (+) |
| G1780353 | NA | other | upstream | 47121 | 15038099 ~ 15043643 (+) |
| G1779636 | NA | other | upstream | 187504 | 14902795 ~ 14903260 (+) |
| G1779170 | NA | other | upstream | 1011025 | 14079497 ~ 14079739 (+) |
| LOC110501417 | LOC106581898 | other | upstream | 2303186 | 12756352 ~ 12787590 (+) |
| G1776709 | NA | other | upstream | 2332568 | 12690062 ~ 12761001 (+) |
| G1780491 | NA | other | downstream | 199425 | 15291362 ~ 15347666 (+) |
| G1780575 | NA | other | downstream | 332774 | 15424711 ~ 15433820 (+) |
| G1781293 | LOC106586198 | other | downstream | 747667 | 15839604 ~ 15848595 (+) |
| G1781423 | LOC106581799 | other | downstream | 970820 | 16062757 ~ 16063401 (+) |
| G1781813 | NA | other | downstream | 1180452 | 16272389 ~ 16273110 (+) |
