G1780907



Basic Information


Item Value
gene id G1780907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15194026 ~ 15194281 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2039120
atgaacactgaacaaaataacaaaacgtgaagctatacaaacgagtgctgacaggcaactacacatagacataaGAACCCACgaacacaaaagggaaaatggctacctaaatatgatccccaatcagagacaatgataaacagctgcctctgattgggaaccatatcaggccaccatagacatacaaatacctagacctacaaaacccctagacatacaaaaaccctagacaatacaaaaactagcatacccaccc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2039120 True 256 lncRNA 0.41 1 15194026 15194281

Neighbor


gene id symbol gene type direction distance location
LOC110501463 LOC106581773 coding downstream 6874 15165903 ~ 15187152 (-)
LOC110501462 gors2 coding downstream 41112 15148842 ~ 15152914 (-)
LOC110501459 LOC106581770 coding downstream 94336 15096036 ~ 15099690 (-)
LOC110501457 dc1i2 coding downstream 105639 15065745 ~ 15088387 (-)
LOC110501455 LOC106581768 coding downstream 150143 15016155 ~ 15043883 (-)
LOC110501465 LOC106581774 coding upstream 6091 15200372 ~ 15202635 (-)
LOC118936393 NA coding upstream 17195 15211476 ~ 15214654 (-)
LOC110502051 myo3b coding upstream 37546 15231827 ~ 15310852 (-)
LOC110501466 ubr3 coding upstream 119878 15314159 ~ 15354447 (-)
LOC110501467 lab coding upstream 162569 15356850 ~ 15360327 (-)
G1780855 NA non-coding downstream 30750 15161960 ~ 15163276 (-)
G1780892 NA non-coding downstream 37875 15155873 ~ 15156151 (-)
G1780264 NA non-coding downstream 253970 14939854 ~ 14940056 (-)
G1780243 NA non-coding downstream 292486 14901334 ~ 14901540 (-)
G1780926 NA non-coding upstream 22353 15216634 ~ 15216871 (-)
G1780931 NA non-coding upstream 25404 15219685 ~ 15220181 (-)
G1780947 NA non-coding upstream 49233 15243514 ~ 15243823 (-)
G1778224 NA other downstream 1863531 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 2021047 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 2569332 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 2923912 12268217 ~ 12270114 (-)
G1777286 NA other downstream 3152404 12041108 ~ 12041622 (-)
G1781137 lrp2 other upstream 373222 15567503 ~ 15568534 (-)
b3galt1b LOC106581793 other upstream 491575 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 1862841 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 2675248 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 3981286 19175567 ~ 19179266 (-)

Expression



Co-expression Network