XLOC_037101 (crygm1)


Basic Information

Item Value
gene id XLOC_037101
gene name crygm1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 22011912 ~ 22012819 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073032
AGCACTTGGAAAAACAGCAGACTACCACCATGGGCAAGGTCATCTTTTACGAGGACAGAAACTTCCAGGGTCGCAACTATGAGTGCATGAGCGACTGTTCTGATATTTCCTCATACCTGGGCCGCGTCGGGTCCATCAGAGTCGAAAGTGGTTGTTTTATTGTCTATGAGCGCAATGGCTTCATGGGCAACCAGTTCTTCCTGAGAAGGGGCGAGTACCATGACATTCAGCGTATGATGAGCATGGGCATGATGTTCGACACTATCAGATCCTGCCGCATGATTCCTTCATACAGGGGATCTTTCAGAATGAGGATTTATGAGAGGGATAACTTTGGAGGACAGATGTACGAGCTGATGGATGACTGTGAGAGCATTCAGGAACGTTACCGCATGTCCGACTGTCAGTCCTGTCACGTAATGGACGGCCACTGGCTCATGTTTGAGCAGCCCCACTACAGAGGCAGGATGATTTACTTCAGGCCTGGAGAGTACAGGAGCTTCAGAGATATGGGATTCAGCAACATGAGATTCATGAGCATGAGACGTATTACTGACATGTGTTAAATCACTAAatgtaaaagcaaataaaacattGTTTCCAGAA

Function

symbol description
crygm1 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens.

GO:

id name namespace
GO:0002088 lens development in camera-type eye biological_process
GO:0007601 visual perception biological_process
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050516-5 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens.

Ensembl:

ensembl_id ENSDARG00000016421

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073032 True 606 mRNA 0.47 3 22011912 22012819

Neighbor

gene id symbol gene type direction distance location
XLOC_037100 si:dkey-57a22.15 coding upstream 7079 22003942 ~ 22004833 (+)
XLOC_037099 crygm6 coding upstream 10134 22000812 ~ 22001778 (+)
XLOC_037098 si:dkey-57a22.14 coding upstream 14763 21996315 ~ 21997149 (+)
XLOC_037097 crygm7 coding upstream 17855 21993092 ~ 21994057 (+)
XLOC_037096 si:dkey-57a22.13 coding upstream 20696 21990058 ~ 21991216 (+)
XLOC_037102 zgc:153846 coding downstream 4549 22017368 ~ 22018304 (+)
XLOC_037103 crygm2e coding downstream 67303 22080122 ~ 22080989 (+)
XLOC_037104 NA coding downstream 299914 22312733 ~ 22313617 (+)
XLOC_037105 crygs3 coding downstream 338624 22351443 ~ 22366295 (+)
XLOC_037106 crygs4 coding downstream 347100 22359919 ~ 22360742 (+)
XLOC_037095 CR536604.1 non-coding upstream 25916 21984109 ~ 21985996 (+)
XLOC_037089 NA non-coding upstream 246177 21761696 ~ 21765735 (+)
XLOC_037086 BX649266.2 non-coding upstream 515213 21495873 ~ 21496699 (+)
XLOC_037078 pla1a non-coding upstream 785780 21214940 ~ 21226132 (+)
XLOC_037077 NA non-coding upstream 806440 21202272 ~ 21205472 (+)
XLOC_037108 BX548053.3 non-coding downstream 564126 22576945 ~ 22577059 (+)
XLOC_037110 NA non-coding downstream 629567 22642386 ~ 22642685 (+)
XLOC_037116 NA non-coding downstream 976122 22988941 ~ 22998060 (+)
XLOC_037119 CR394542.1 non-coding downstream 1033448 23046267 ~ 23046385 (+)

Expression


Co-expression Network