G1781025


Basic Information

Item Value
gene id G1781025
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15385933 ~ 15386451 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2039259
CCTCATTATCGTTATGTGTAAATCCAGCTACTTGTAAAGAGATCAATAAGACCTTTCTTGACTTCATCTGGAAAAATAAGCCTCTCAAACTAAAAAAATATGTCCTTTCTAACCAAAGAGCTGAAGGCGGTCTAGAAGTGTTGGACTTTGTTGacataaataacactttcaagatAAACTGGTTGAAAAAATGTTTGCTCGATACTGATTCAATATGGTATTTCATTCCAAATAATGTGTTTAATAAATTGGGTGGTCTTCAATTTTtactgaaatgtaattatattcctgAAAGATTACCTGCTAAATTGGCTAGGTTTCACCAACAAGCTTTACTGGCCTGGAAAATATGTTTCCTGCACAATTTTCCCCacataaagctcttttgtggaatAATTCAGACATAACTGTAAGGAATAAGTCATTGTTCTACCCCAGCTGGCATGAGAGGAATATTGACTTTGTCCTTGATATTTTCGACAACAAGGGTAATATTCTCTCATATGAACAATTTATAAC

Function

NR:

description
uncharacterized protein LOC105941010, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2039259 True 519 lncRNA 0.34 1 15385933 15386451

Neighbor

gene id symbol gene type direction distance location
phgdh LOC106581777 coding downstream 6789 15365708 ~ 15379144 (-)
klhl23 klhl23 coding downstream 20365 15361643 ~ 15365568 (-)
LOC110501467 lab coding downstream 25606 15356850 ~ 15360327 (-)
LOC110501466 ubr3 coding downstream 31486 15314159 ~ 15354447 (-)
LOC110502051 myo3b coding downstream 75081 15231827 ~ 15310852 (-)
LOC110501472 ppig coding upstream 8524 15394975 ~ 15401706 (-)
klhl41a LOC106586209 coding upstream 28449 15414900 ~ 15423802 (-)
bbs5 bbs5 coding upstream 38267 15424718 ~ 15433882 (-)
col28a2a LOC106581781 coding upstream 59601 15446052 ~ 15480514 (-)
zgc:172182 LOC106581782 coding upstream 110721 15497172 ~ 15501749 (-)
G1781021 NA non-coding downstream 6248 15379432 ~ 15379685 (-)
G1780923 NA non-coding downstream 115804 15269756 ~ 15270129 (-)
G1780969 NA non-coding downstream 116343 15267522 ~ 15269590 (-)
G1780964 NA non-coding downstream 123982 15261474 ~ 15261951 (-)
G1780962 NA non-coding downstream 126169 15259561 ~ 15259764 (-)
G1781027 NA non-coding upstream 1313 15387764 ~ 15387970 (-)
G1781106 lrp2 non-coding upstream 147582 15534033 ~ 15538622 (-)
G1781137 lrp2 non-coding upstream 181478 15567503 ~ 15568534 (-)
G1781192 NA non-coding upstream 285772 15672223 ~ 15678026 (-)
G1781203 NA non-coding upstream 303338 15689789 ~ 15690167 (-)
G1778224 NA other downstream 2055438 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 2212954 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 2761239 12620582 ~ 12624860 (-)
G1777441 LOC106581914 other downstream 3115819 12268217 ~ 12270114 (-)
G1777286 NA other downstream 3344311 12041108 ~ 12041622 (-)
b3galt1b LOC106581793 other upstream 299405 15684423 ~ 15825221 (-)
LOC110501514 dapl1 other upstream 1670671 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 2483078 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 3789116 19175567 ~ 19179266 (-)

Expression


Co-expression Network