G1781526


Basic Information

Item Value
gene id G1781526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 15964004 ~ 15965985 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2039819
CCGCATTAAGTTTCAATATGGTAGATATTGCATTCTTGGTCTGTGTATGAAGTTTGATCATCATTTCAAGTTGAGAAAAGTTTTAAATATTCAATTTCTCTAAGGTTCTCTCAGGTTCCGTTTTCAAATTCAGTTCTCTAAATTCTGATTCAAACCAACATCCTGGTACTTTGCTAGCTATTATGACCCCATGCCTGAAAGGTGAGACTATGGAGCATTTACATGCCTTGTGTTTCCCTTTACGATACTCACAAGCCGCACAGGACACATTACAAGGGAGTGTGACAAACAGACACAATTTGACCCCCATAATAATATTGTTGAATATCTCTGTGTAGCAGAGCCTGGGGATATTTaactacagtgagctccaaaagtattgtttaagctctgtactccagcactttggatttgaaatgatacaatgactatgaggttatcGTGCAAACTGTCAGATTTAATTTGAGGTTATTTTCATCCATTCATTTTGAACCGTTTCGAAACTacaacactttttgtacatagtccaccCAATGTTAAgggtgagacacagagtaggtgaacggatgatctcctcatgtgtAGTTCCTACCATGaaccatggaggaggaggtgtgagggtgctttgatggtgacactgtctgtgatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcgtacgccatcccatctggtttgcatttagtgggactgtcaattgtttttcaacaggacaatgacccaacacacctccaggctgtgtaagggctatttgaccaagaaggagagtgatggagtgctgcatcagatgacctggcctccacaatcaccccagtcctcaacccaattgagatggttttaggatgagttggaccacagagtgaaggaaaagcagccaacaagtgctcagaatatgtgggaactccttcaagactgttggaaaagcattccatgtgaagctggttgagagaatcccaagagtgtgcaaagctgtcatcagggaaaagggtggctacttggaagaatctcaaatagaaaatatattttgatttgtttaacacttttttggttactacatgttccatatgtgttattaacttcattttgaggtcttcactattattctacaaggtagaaaatagtacaaataaagaaaaaccctggaatgagtaggtgtgtacaaactttttactggcactgtatattgaaTTTAAATAGAATTTTAAAACAGAATGCAATATTCATTCAATTCCGTTTCAAATCATTAAATATAAGTTAAATTTATGAAAGTAATTATTCAATTTGTGCATTACAATTTCCAAAACATTGAATTCAAATATAGTTTCTGTGGACACTTAAATCACT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2039819 True 1391 lncRNA 0.38 2 15964004 15965985

Neighbor

gene id symbol gene type direction distance location
LOC110501489 LOC106581797 coding downstream 6505 15946465 ~ 15957499 (-)
xirp2b LOC106586198 coding downstream 93959 15837019 ~ 15870045 (-)
b3galt1b LOC106581793 coding downstream 138783 15684423 ~ 15825221 (-)
cers6 cers6 coding downstream 318375 15623457 ~ 15645629 (-)
nostrin nostrin coding downstream 345323 15614412 ~ 15618681 (-)
galnt3 galnt3 coding upstream 24154 15990139 ~ 16000472 (-)
ttc21b ttc21b coding upstream 36562 16002547 ~ 16021067 (-)
LOC110501493 LOC106581799 coding upstream 79538 16045523 ~ 16088614 (-)
LOC110501500 LOC106581805 coding upstream 575270 16541255 ~ 16596674 (-)
LOC110501502 tbr1 coding upstream 655840 16621825 ~ 16626574 (-)
G1781449 NA non-coding downstream 72279 15828499 ~ 15891725 (-)
G1781260 NA non-coding downstream 167348 15785021 ~ 15796656 (-)
G1781203 NA non-coding downstream 273837 15689789 ~ 15690167 (-)
G1781192 NA non-coding downstream 285978 15672223 ~ 15678026 (-)
G1781137 lrp2 non-coding downstream 395470 15567503 ~ 15568534 (-)
G1781564 NA non-coding upstream 93991 16059976 ~ 16060205 (-)
G1781567 NA non-coding upstream 100220 16066205 ~ 16066526 (-)
G1781570 NA non-coding upstream 108541 16074526 ~ 16074811 (-)
G1781607 NA non-coding upstream 139204 16105189 ~ 16105649 (-)
G1781715 cobll1 non-coding upstream 182722 16148707 ~ 16151986 (-)
G1778224 NA other downstream 2633509 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 2791025 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 3339310 12620582 ~ 12624860 (-)
LOC110501514 dapl1 other upstream 1091137 17057104 ~ 17063550 (-)
G1783895 LOC106581829 other upstream 1903544 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 3209582 19175567 ~ 19179266 (-)
G1785753 NA other upstream 3355203 19321188 ~ 19321859 (-)
znf142 znf142 other upstream 3690297 19655763 ~ 19666201 (-)

Expression


Co-expression Network