Gene
RNA
| Item | Value |
|---|---|
| gene id | G1781415 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 16049794 ~ 16050057 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2039701 | True | 264 | lncRNA | 0.52 | 1 | 16049794 | 16050057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csrnp3 | LOC106581794 | coding | upstream | 61676 | 15922382 ~ 15988118 (+) |
| LOC110501488 | NA | coding | upstream | 188750 | 15859166 ~ 15861044 (+) |
| stk39 | stk39 | coding | upstream | 366295 | 15647913 ~ 15683499 (+) |
| spc25 | spc25 | coding | upstream | 435439 | 15610247 ~ 15614355 (+) |
| abcb11a | LOC106581787 | coding | upstream | 442528 | 15590720 ~ 15607266 (+) |
| LOC110501495 | cobll1 | coding | downstream | 68129 | 16118186 ~ 16151990 (+) |
| LOC110501496 | LOC106581801 | coding | downstream | 102182 | 16152239 ~ 16217207 (+) |
| LOC110501497 | LOC106581802 | coding | downstream | 278721 | 16328778 ~ 16338520 (+) |
| LOC110502057 | LOC106581803 | coding | downstream | 393979 | 16444036 ~ 16494451 (+) |
| ifih1 | mda5 | coding | downstream | 451404 | 16501461 ~ 16519607 (+) |
| G1781365 | LOC106581799 | non-coding | upstream | 681 | 16048853 ~ 16049113 (+) |
| G1781333 | NA | non-coding | upstream | 77552 | 15953553 ~ 15972242 (+) |
| G1781292 | NA | non-coding | upstream | 211067 | 15837013 ~ 15838727 (+) |
| lrp2a | lrp2 | non-coding | upstream | 476824 | 15503060 ~ 15572970 (+) |
| G1781416 | LOC106533619 | non-coding | downstream | 6 | 16050063 ~ 16050759 (+) |
| G1781417 | LOC106581799 | non-coding | downstream | 3027 | 16053084 ~ 16053332 (+) |
| G1781419 | NA | non-coding | downstream | 4889 | 16054946 ~ 16055968 (+) |
| G1781420 | NA | non-coding | downstream | 5915 | 16055972 ~ 16056260 (+) |
| G1781422 | LOC106581799 | non-coding | downstream | 11324 | 16061381 ~ 16062519 (+) |
| G1781293 | LOC106586198 | other | upstream | 201199 | 15839604 ~ 15848595 (+) |
| G1780575 | NA | other | upstream | 615974 | 15424711 ~ 15433820 (+) |
| G1780491 | NA | other | upstream | 702128 | 15291362 ~ 15347666 (+) |
| G1780353 | NA | other | upstream | 1006151 | 15038099 ~ 15043643 (+) |
| G1779636 | NA | other | upstream | 1146534 | 14902795 ~ 14903260 (+) |
| G1781423 | LOC106581799 | other | downstream | 12700 | 16062757 ~ 16063401 (+) |
| G1781813 | NA | other | downstream | 222332 | 16272389 ~ 16273110 (+) |
| G1782390 | NA | other | downstream | 955977 | 17006034 ~ 17041673 (+) |
| G1783087 | NA | other | downstream | 1245896 | 17295953 ~ 17296359 (+) |
| G1783622 | NA | other | downstream | 1691700 | 17741757 ~ 17742435 (+) |
