Gene
RNA
| Item | Value |
|---|---|
| gene id | G1781564 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 16059976 ~ 16060205 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2039860 | True | 230 | lncRNA | 0.37 | 1 | 16059976 | 16060205 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ttc21b | ttc21b | coding | downstream | 38909 | 16002547 ~ 16021067 (-) |
| galnt3 | galnt3 | coding | downstream | 59504 | 15990139 ~ 16000472 (-) |
| LOC110501489 | LOC106581797 | coding | downstream | 102477 | 15946465 ~ 15957499 (-) |
| xirp2b | LOC106586198 | coding | downstream | 189931 | 15837019 ~ 15870045 (-) |
| b3galt1b | LOC106581793 | coding | downstream | 234755 | 15684423 ~ 15825221 (-) |
| LOC110501500 | LOC106581805 | coding | upstream | 481050 | 16541255 ~ 16596674 (-) |
| LOC110501502 | tbr1 | coding | upstream | 561620 | 16621825 ~ 16626574 (-) |
| LOC110501503 | tank | coding | upstream | 587689 | 16647894 ~ 16654144 (-) |
| LOC110501509 | tanc1 | coding | upstream | 808118 | 16868323 ~ 17049285 (-) |
| LOC110501514 | dapl1 | coding | upstream | 996899 | 17057104 ~ 17063550 (-) |
| G1781526 | NA | non-coding | downstream | 93991 | 15964004 ~ 15965985 (-) |
| G1781449 | NA | non-coding | downstream | 168251 | 15828499 ~ 15891725 (-) |
| G1781260 | NA | non-coding | downstream | 263320 | 15785021 ~ 15796656 (-) |
| G1781203 | NA | non-coding | downstream | 369809 | 15689789 ~ 15690167 (-) |
| G1781192 | NA | non-coding | downstream | 381950 | 15672223 ~ 15678026 (-) |
| G1781567 | NA | non-coding | upstream | 6000 | 16066205 ~ 16066526 (-) |
| G1781570 | NA | non-coding | upstream | 14321 | 16074526 ~ 16074811 (-) |
| G1781607 | NA | non-coding | upstream | 44984 | 16105189 ~ 16105649 (-) |
| G1781715 | cobll1 | non-coding | upstream | 88502 | 16148707 ~ 16151986 (-) |
| G1781727 | NA | non-coding | upstream | 102934 | 16163139 ~ 16163414 (-) |
| G1781137 | lrp2 | other | downstream | 491442 | 15567503 ~ 15568534 (-) |
| G1778224 | NA | other | downstream | 2729481 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 2886997 | 13168780 ~ 13172979 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 3435282 | 12620582 ~ 12624860 (-) |
| G1783895 | LOC106581829 | other | upstream | 1809324 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 3115362 | 19175567 ~ 19179266 (-) |
| G1785753 | NA | other | upstream | 3260983 | 19321188 ~ 19321859 (-) |
| znf142 | znf142 | other | upstream | 3596077 | 19655763 ~ 19666201 (-) |
