XLOC_037106 (crygs4)


Basic Information

Item Value
gene id XLOC_037106
gene name crygs4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 22359919 ~ 22360742 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073037
AAATAGACTACAGCACAGTTTGCCATCCAACATTTCTGACAATGGCTACTGAGAGTATTGTGTTCTACGAAGACAGGAACTTCCAGGGAAGATCCTATGAGTGCAAGGGAGACACAAGTGACCTTCATTCTTTTTTTAGCCGCTGCAATTCTGCAAGGGTAAAAGGGGGCTTTTGGGTCCTGTATGAGCGGCCAAACTATATGGGTTATCAGTATATTCTGGGTCCAGGAGAATATCCAGATTATCAACATTGGATTGGCTTCAACGATTGTGTCCGATCTTGTCGTCTAGTCAGGCATGTAATTGGAGatctgaagctcaaactctttGAGAGGCCCAACTTTGATGGACAAACATGGGAAGTGACAGAAAGCACCCCGTCCATTCAGGAACGTTTCCTCTGCCGAGAGATCAATTCCTGCAAAGTTCATGAAGCTCCGTGCGTGTTCTTCGAGCATGCAAACTACCGTGGCCGTCAGTACTTCCTTGAGAAGGGAGAGTACAGACGACACACTGAATGGGGGGCCATGCATCCCACTGTGGGCTCTATTCGCCAGATCACCACAGACTGATAAATTGAAAATTGCTCACTAATACTACtgaaaagctttaaaaaataaacatatttgaagAGGCA
>TCONS_00073038
GGCTACTGAGAGTGTAAGTGCCTCTGTCTCCCTTACTGTCCCTCATTCTCACACAATGTTTTTGCACCATTTAACTGCCAGTGATGTTTTTTTCAGATTGTGTTCTACGAAGACAGGAACTTCCAGGGAAGATCCTATGAGTGCAAGGGAGACACAAGTGACCTTCATTCTTTTTTTAGCCGCTGCAATTCTGCAAGGGTAAAAGGGGGCTTTTGGGTCCTGTATGAGCGGCCAAACTATATGGGTTATCAGTATATTCTGGGTCCAGGAGAATATCCAGATTATCAACATTGGATTGGCTTCAACGATTGTGTCCGATCTTGTCGTCTAGTCAGGCATGTAATTGGAGatctgaagctcaaactctttGAGAGGCCCAACTTTGATGGACAAACATGGGAAGTGACAGAAAGCACCCCGTCCATTCAGGAACGTTTCCTCTGCCGAGAGATCAATTCCTGCAAAGTTCATGAAGCTCCGTGCGTGTTCTTCGAGCATGCAAACTACCGTGGCCGTCAGTACTTCCTTGAGAAGGGAGAGTACAGACGACACACTGAATGGGGGGCCATGCATCCCACTGTGGGCTCTATTCGCCAGATCACCACAGACTGATAAATTGAAAATTGCTCACTAATACTACtgaaaagctttaaaaaataaacatatttgaagAGGCA

Function

symbol description
crygs4 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens.

GO:

id name namespace
GO:0002088 lens development in camera-type eye biological_process
GO:0007601 visual perception biological_process
GO:0005212 structural constituent of eye lens molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050223-2 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens.

Ensembl:

ensembl_id ENSDARG00000010701

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073037 False 637 mRNA 0.45 3 22359919 22360742
TCONS_00073038 True 677 lncRNA 0.45 2 22359962 22360742

Neighbor

gene id symbol gene type direction distance location
XLOC_037104 NA coding upstream 46302 22312733 ~ 22313617 (+)
XLOC_037103 crygm2e coding upstream 278930 22080122 ~ 22080989 (+)
XLOC_037102 zgc:153846 coding upstream 341615 22017368 ~ 22018304 (+)
XLOC_037101 crygm1 coding upstream 347100 22011912 ~ 22012819 (+)
XLOC_037100 si:dkey-57a22.15 coding upstream 355086 22003942 ~ 22004833 (+)
XLOC_037107 dgkg coding downstream 14589 22375331 ~ 22618558 (+)
XLOC_037108 BX548053.3 coding downstream 216203 22576945 ~ 22577059 (+)
XLOC_037109 etv5a coding downstream 270930 22631672 ~ 22649297 (+)
XLOC_037110 NA coding downstream 281644 22642386 ~ 22642685 (+)
XLOC_037111 si:dkey-189g17.2 coding downstream 296234 22656976 ~ 22672826 (+)
XLOC_037095 CR536604.1 non-coding upstream 373923 21984109 ~ 21985996 (+)
XLOC_037089 NA non-coding upstream 594184 21761696 ~ 21765735 (+)
XLOC_037086 BX649266.2 non-coding upstream 863220 21495873 ~ 21496699 (+)
XLOC_037078 pla1a non-coding upstream 1133787 21214940 ~ 21226132 (+)
XLOC_037116 NA non-coding downstream 628199 22988941 ~ 22998060 (+)
XLOC_037119 CR394542.1 non-coding downstream 685525 23046267 ~ 23046385 (+)
XLOC_037122 NA non-coding downstream 765414 23126156 ~ 23128231 (+)

Expression


Co-expression Network