G1781443


Basic Information

Item Value
gene id G1781443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 16084796 ~ 16085036 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2039735
attctctctactattattctgacatttcaggttcttaaaataaagtggtgatcctaactgacctaagacagggaatgtttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttggctacggtgtatgtaaacttctgacttcagctgtacatatctacctctatcactccactATCCCTGCCCATTGTAAATATGCTACTGgaactgactgaccctgtatatagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2039735 True 241 lncRNA 0.37 1 16084796 16085036

Neighbor

gene id symbol gene type direction distance location
csrnp3 LOC106581794 coding upstream 96678 15922382 ~ 15988118 (+)
LOC110501488 NA coding upstream 223752 15859166 ~ 15861044 (+)
stk39 stk39 coding upstream 401297 15647913 ~ 15683499 (+)
spc25 spc25 coding upstream 470441 15610247 ~ 15614355 (+)
abcb11a LOC106581787 coding upstream 477530 15590720 ~ 15607266 (+)
LOC110501495 cobll1 coding downstream 33150 16118186 ~ 16151990 (+)
LOC110501496 LOC106581801 coding downstream 67203 16152239 ~ 16217207 (+)
LOC110501497 LOC106581802 coding downstream 243742 16328778 ~ 16338520 (+)
LOC110502057 LOC106581803 coding downstream 359000 16444036 ~ 16494451 (+)
ifih1 mda5 coding downstream 416425 16501461 ~ 16519607 (+)
G1781438 LOC106581799 non-coding upstream 5352 16079147 ~ 16079444 (+)
G1781432 LOC106581799 non-coding upstream 11179 16073373 ~ 16073617 (+)
G1781431 NA non-coding upstream 11943 16072452 ~ 16072853 (+)
G1781426 NA non-coding upstream 17324 16066671 ~ 16067472 (+)
G1781425 NA non-coding upstream 19370 16065133 ~ 16065426 (+)
G1781613 NA non-coding downstream 24538 16109574 ~ 16111706 (+)
G1781804 NA non-coding downstream 181188 16266224 ~ 16266438 (+)
G1781805 NA non-coding downstream 181604 16266640 ~ 16266865 (+)
G1781816 LOC106578716 non-coding downstream 188262 16273298 ~ 16273551 (+)
G1781818 NA non-coding downstream 189796 16274832 ~ 16275273 (+)
G1781423 LOC106581799 other upstream 21395 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 236201 15839604 ~ 15848595 (+)
G1780575 NA other upstream 650976 15424711 ~ 15433820 (+)
G1780491 NA other upstream 737130 15291362 ~ 15347666 (+)
G1780353 NA other upstream 1041153 15038099 ~ 15043643 (+)
G1781813 NA other downstream 187353 16272389 ~ 16273110 (+)
G1782390 NA other downstream 920998 17006034 ~ 17041673 (+)
G1783087 NA other downstream 1210917 17295953 ~ 17296359 (+)
G1783622 NA other downstream 1656721 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 1824864 17909900 ~ 17911226 (+)

Expression


Co-expression Network