G1781813


Basic Information

Item Value
gene id G1781813
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 16272389 ~ 16273110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2040116
GTGTCAGACTTGGTATCAGGACGTTTCCGTGTTGGTGTAGTATCTACACTGCCAGTAAAAGGAGTCACATTGCTACTAGGGAATGATATTGCTGGTGGTAATGTCATTCCTGTGTTAGAGGTAGTAGACAATCCAGAAATCAGAACTACAGATGAGAAATTGGTTCAAGCATTTCCACATGTTTTTCCTGCTTGTGTCTTAACGAGGGCACAATCTCGCAAGCTAGGAGATGTGGTGGATTTGGCTAGTTCCATTTTTGAGAATGTTGAGGTAGAAGATCATGCACCGAGTATGCCTTCTGCAATGCCGACAGTTTTTACACCCGTAAAAACTAAGGCAGGGGAAAACGAAATTGTGCCCCAATTACATGACATTCTTTTGTCTGTCACCCCTGAGAAGGTGATTGAATGTCAAAAAGAAGACACCAGTCTTCGCAAGTGTTTTGCTTCGGTAATTTCCATTGAGGAAGCAAAAACTAGAGAGACCGCCTACTTTATGGAAGCAGGAGTTTTGATGCGTAAATGGGCATCTCATGACACCATTAATGACTGGAGTGAAGTGTGTCAAGTGGTTGTTCCTACACCGTTCCGACAGCAGGTGCTGTCACTCGCCCATGACCAGGCGTGGTCTGGACACTTGGGGATCACAAAGACTTATAACCGGGTCCTTCGTCATTTCTTCTGGCCAGGTTTGAAGTCTGACGTGGTCCAATTTTGTAAAAC

Function

NR:

description
uncharacterized protein LOC110509518

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2040116 True 722 TUCP 0.45 1 16272389 16273110

Neighbor

gene id symbol gene type direction distance location
LOC110501496 LOC106581801 coding upstream 55182 16152239 ~ 16217207 (+)
LOC110501495 cobll1 coding upstream 120399 16118186 ~ 16151990 (+)
csrnp3 LOC106581794 coding upstream 284271 15922382 ~ 15988118 (+)
LOC110501488 NA coding upstream 411345 15859166 ~ 15861044 (+)
stk39 stk39 coding upstream 588890 15647913 ~ 15683499 (+)
LOC110501497 LOC106581802 coding downstream 55668 16328778 ~ 16338520 (+)
LOC110502057 LOC106581803 coding downstream 170926 16444036 ~ 16494451 (+)
ifih1 mda5 coding downstream 228351 16501461 ~ 16519607 (+)
LOC110501499 gcg coding downstream 262228 16535338 ~ 16537328 (+)
LOC110501504 NA coding downstream 395381 16668491 ~ 16733286 (+)
G1781805 NA non-coding upstream 5524 16266640 ~ 16266865 (+)
G1781804 NA non-coding upstream 5951 16266224 ~ 16266438 (+)
G1781613 NA non-coding upstream 160683 16109574 ~ 16111706 (+)
G1781443 NA non-coding upstream 187353 16084796 ~ 16085036 (+)
G1781438 LOC106581799 non-coding upstream 192945 16079147 ~ 16079444 (+)
G1781816 LOC106578716 non-coding downstream 188 16273298 ~ 16273551 (+)
G1781818 NA non-coding downstream 1722 16274832 ~ 16275273 (+)
G1781986 NA non-coding downstream 112836 16385946 ~ 16386498 (+)
G1782004 NA non-coding downstream 123005 16396115 ~ 16396325 (+)
G1782020 NA non-coding downstream 131892 16405002 ~ 16405282 (+)
G1781423 LOC106581799 other upstream 208988 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 423794 15839604 ~ 15848595 (+)
G1780575 NA other upstream 838569 15424711 ~ 15433820 (+)
G1780491 NA other upstream 924723 15291362 ~ 15347666 (+)
G1780353 NA other upstream 1228746 15038099 ~ 15043643 (+)
G1782390 NA other downstream 732924 17006034 ~ 17041673 (+)
G1783087 NA other downstream 1022843 17295953 ~ 17296359 (+)
G1783622 NA other downstream 1468647 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 1636790 17909900 ~ 17911226 (+)
kalrna LOC106581831 other downstream 1828821 18101519 ~ 18386130 (+)

Expression


Co-expression Network