XLOC_037110


Basic Information

Item Value
gene id XLOC_037110
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 22642386 ~ 22642685 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00074896
ttcattatgttgattttatttatgtaaatgaaCATCTACTGTTTATAATATTCTATTAATATACAATGATTTTAAGATGAgccaagattaataaatgctttacactTGGGTTgttaatgggctatatgcacagctagggatattcagccaatgatgaacttttGGTGAAAGGTTTGCGACTATCTTCAGTTTCAtagggttccttttacagcatggatgttgtaaagtcattcaaatataatcagtttaatAGACTTCAGCGTGGATTTGGctgttaaagcataaaaagagaGGAAAGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00074896 True 300 lncRNA 0.32 1 22642386 22642685

Neighbor

gene id symbol gene type direction distance location
XLOC_037107 dgkg coding upstream 23828 22375331 ~ 22618558 (+)
XLOC_037108 BX548053.3 coding upstream 65327 22576945 ~ 22577059 (+)
XLOC_037105 crygs3 coding upstream 276091 22351443 ~ 22366295 (+)
XLOC_037106 crygs4 coding upstream 281644 22359919 ~ 22360742 (+)
XLOC_037104 NA coding upstream 328769 22312733 ~ 22313617 (+)
XLOC_037111 si:dkey-189g17.2 coding downstream 14291 22656976 ~ 22672826 (+)
XLOC_037112 itgb5 coding downstream 34818 22677503 ~ 22748015 (+)
XLOC_037113 tnfaip6 coding downstream 121550 22764235 ~ 22779813 (+)
XLOC_037114 rif1 coding downstream 138216 22780901 ~ 22802172 (+)
XLOC_037115 tsn coding downstream 286990 22929675 ~ 22939510 (+)
XLOC_037095 CR536604.1 non-coding upstream 656390 21984109 ~ 21985996 (+)
XLOC_037089 NA non-coding upstream 876651 21761696 ~ 21765735 (+)
XLOC_037086 BX649266.2 non-coding upstream 1145687 21495873 ~ 21496699 (+)
XLOC_037116 NA non-coding downstream 346256 22988941 ~ 22998060 (+)
XLOC_037119 CR394542.1 non-coding downstream 403582 23046267 ~ 23046385 (+)
XLOC_037122 NA non-coding downstream 483471 23126156 ~ 23128231 (+)
XLOC_037126 NA non-coding downstream 679149 23321834 ~ 23333979 (+)
XLOC_037127 NA non-coding downstream 721163 23363848 ~ 23456345 (+)

Expression


Co-expression Network