G1782140


Basic Information

Item Value
gene id G1782140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 16609867 ~ 16610209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2040469
gggtaatagatccaacgggatatgtcgagttgtttgggaacttggctggggtgttcagagattattatttcatgtacaccatttattttccttttatgtgaacgcagctgtaactactatccacttttacccagcgatgacttgcactaaagttcgattactgttcgatgacgatgactagcaccttaaatctattgacatggaactgccatggtctagggcatgcaataaaacggaaaaagatactatgtgctctaaaaaaggaaaaagcagacattgcgctattacaagagacacacctctgtgatgctgaacatgccaaactctgcagagcttgggtggg

Function

NR:

description
PREDICTED: CMP-sialic acid transporter-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2040469 True 343 lncRNA 0.42 1 16609867 16610209

Neighbor

gene id symbol gene type direction distance location
LOC110501499 gcg coding upstream 72539 16535338 ~ 16537328 (+)
ifih1 mda5 coding upstream 90260 16501461 ~ 16519607 (+)
LOC110502057 LOC106581803 coding upstream 115416 16444036 ~ 16494451 (+)
LOC110501497 LOC106581802 coding upstream 271347 16328778 ~ 16338520 (+)
LOC110501496 LOC106581801 coding upstream 392660 16152239 ~ 16217207 (+)
LOC110501504 NA coding downstream 58282 16668491 ~ 16733286 (+)
LOC110501506 cd302 coding downstream 129331 16739540 ~ 16745332 (+)
LOC110501507 baz2b coding downstream 144113 16754322 ~ 16844200 (+)
LOC110502058 NA coding downstream 236709 16846918 ~ 16864386 (+)
LOC110501510 NA coding downstream 243447 16853656 ~ 16854704 (+)
G1782137 NA non-coding upstream 4187 16605450 ~ 16605680 (+)
G1782131 NA non-coding upstream 9993 16599532 ~ 16599874 (+)
G1782020 NA non-coding upstream 204585 16405002 ~ 16405282 (+)
G1782004 NA non-coding upstream 213542 16396115 ~ 16396325 (+)
G1781986 NA non-coding upstream 223369 16385946 ~ 16386498 (+)
G1782143 NA non-coding downstream 4255 16614464 ~ 16614726 (+)
G1782144 NA non-coding downstream 4815 16615024 ~ 16621383 (+)
G1782177 NA non-coding downstream 37687 16647896 ~ 16650105 (+)
G1782181 NA non-coding downstream 47905 16658114 ~ 16658329 (+)
G1782219 NA non-coding downstream 141696 16751905 ~ 16752201 (+)
G1781813 NA other upstream 336757 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 546466 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 761272 15839604 ~ 15848595 (+)
G1780575 NA other upstream 1176047 15424711 ~ 15433820 (+)
G1780491 NA other upstream 1262201 15291362 ~ 15347666 (+)
G1782390 NA other downstream 395825 17006034 ~ 17041673 (+)
G1783087 NA other downstream 685744 17295953 ~ 17296359 (+)
G1783622 NA other downstream 1131548 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 1299691 17909900 ~ 17911226 (+)
kalrna LOC106581831 other downstream 1491722 18101519 ~ 18386130 (+)

Expression


Co-expression Network