Gene
RNA
| Item | Value |
|---|---|
| gene id | G1782702 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 16647337 ~ 16647525 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2041080 | True | 189 | lncRNA | 0.30 | 1 | 16647337 | 16647525 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501502 | tbr1 | coding | downstream | 20763 | 16621825 ~ 16626574 (-) |
| LOC110501500 | LOC106581805 | coding | downstream | 50663 | 16541255 ~ 16596674 (-) |
| LOC110501493 | LOC106581799 | coding | downstream | 558723 | 16045523 ~ 16088614 (-) |
| ttc21b | ttc21b | coding | downstream | 626270 | 16002547 ~ 16021067 (-) |
| galnt3 | galnt3 | coding | downstream | 646865 | 15990139 ~ 16000472 (-) |
| LOC110501503 | tank | coding | upstream | 369 | 16647894 ~ 16654144 (-) |
| LOC110501509 | tanc1 | coding | upstream | 220798 | 16868323 ~ 17049285 (-) |
| LOC110501514 | dapl1 | coding | upstream | 409579 | 17057104 ~ 17063550 (-) |
| LOC110501511 | pkp4 | coding | upstream | 416810 | 17064335 ~ 17178344 (-) |
| LOC110501516 | LOC106586173 | coding | upstream | 586870 | 17234395 ~ 17241046 (-) |
| G1782685 | NA | non-coding | downstream | 15008 | 16631934 ~ 16632329 (-) |
| G1782657 | NA | non-coding | downstream | 45361 | 16601653 ~ 16601976 (-) |
| G1782605 | LOC106581803 | non-coding | downstream | 152925 | 16492387 ~ 16494412 (-) |
| G1782604 | LOC106581803 | non-coding | downstream | 156447 | 16488914 ~ 16490890 (-) |
| G1782599 | LOC106581803 | non-coding | downstream | 167659 | 16478202 ~ 16479678 (-) |
| G1782704 | NA | non-coding | upstream | 11775 | 16659300 ~ 16659805 (-) |
| G1782708 | NA | non-coding | upstream | 14472 | 16661997 ~ 16662206 (-) |
| G1782678 | NA | non-coding | upstream | 17077 | 16664602 ~ 16668745 (-) |
| G1782716 | NA | non-coding | upstream | 23983 | 16671508 ~ 16671792 (-) |
| G1782717 | NA | non-coding | upstream | 24571 | 16672096 ~ 16672365 (-) |
| b3galt1b | LOC106581793 | other | downstream | 822123 | 15684423 ~ 15825221 (-) |
| G1781137 | lrp2 | other | downstream | 1078803 | 15567503 ~ 15568534 (-) |
| G1778224 | NA | other | downstream | 3316842 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 3474358 | 13168780 ~ 13172979 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 4022643 | 12620582 ~ 12624860 (-) |
| G1783895 | LOC106581829 | other | upstream | 1222004 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 2528042 | 19175567 ~ 19179266 (-) |
| G1785753 | NA | other | upstream | 2673663 | 19321188 ~ 19321859 (-) |
| znf142 | znf142 | other | upstream | 3008757 | 19655763 ~ 19666201 (-) |
