G1782704


Basic Information

Item Value
gene id G1782704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 16659300 ~ 16659805 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2041082
gagttctgtcatactatccaggtctgtgcccaaacagttcgagcttctacttttaaaaatccacctttccagaaacaagtctctcactgttgccgcttgttatagacccccctcagccctcaCCATAAGTGAATTAATTGCACCCcctttatcttcagagttcgtactgttaggtgacctaaactgggatatgcttaacactccTACAATCTAagttagatgccctcaatctcacacaaattatcaaggaacctaccaggtactctctaaatatacctctgctgtctaccaccctggggcggcagggtagcctagtggttagagcgttggactagtaaccagaaggttgcgagttcaaacccacgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcccaggccgtcattgaaaataagaatttgttcttaactgacttgcctggttaaataaaggtaaaataaaaaaaaaaaaataaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2041082 True 506 lncRNA 0.43 1 16659300 16659805

Neighbor

gene id symbol gene type direction distance location
LOC110501503 tank coding downstream 5156 16647894 ~ 16654144 (-)
LOC110501502 tbr1 coding downstream 32726 16621825 ~ 16626574 (-)
LOC110501500 LOC106581805 coding downstream 62626 16541255 ~ 16596674 (-)
LOC110501493 LOC106581799 coding downstream 570686 16045523 ~ 16088614 (-)
ttc21b ttc21b coding downstream 638233 16002547 ~ 16021067 (-)
LOC110501509 tanc1 coding upstream 208518 16868323 ~ 17049285 (-)
LOC110501514 dapl1 coding upstream 397299 17057104 ~ 17063550 (-)
LOC110501511 pkp4 coding upstream 404530 17064335 ~ 17178344 (-)
LOC110501516 LOC106586173 coding upstream 574590 17234395 ~ 17241046 (-)
LOC110501517 LOC106581816 coding upstream 581903 17241708 ~ 17253527 (-)
G1782702 NA non-coding downstream 11775 16647337 ~ 16647525 (-)
G1782685 NA non-coding downstream 26971 16631934 ~ 16632329 (-)
G1782657 NA non-coding downstream 57324 16601653 ~ 16601976 (-)
G1782605 LOC106581803 non-coding downstream 164888 16492387 ~ 16494412 (-)
G1782604 LOC106581803 non-coding downstream 168410 16488914 ~ 16490890 (-)
G1782708 NA non-coding upstream 2192 16661997 ~ 16662206 (-)
G1782678 NA non-coding upstream 4797 16664602 ~ 16668745 (-)
G1782716 NA non-coding upstream 11703 16671508 ~ 16671792 (-)
G1782717 NA non-coding upstream 12291 16672096 ~ 16672365 (-)
G1782722 NA non-coding upstream 18734 16678539 ~ 16678888 (-)
b3galt1b LOC106581793 other downstream 834086 15684423 ~ 15825221 (-)
G1781137 lrp2 other downstream 1090766 15567503 ~ 15568534 (-)
G1778224 NA other downstream 3328805 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 3486321 13168780 ~ 13172979 (-)
LOC110501411 LOC106581904 other downstream 4034606 12620582 ~ 12624860 (-)
G1783895 LOC106581829 other upstream 1209724 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 2515762 19175567 ~ 19179266 (-)
G1785753 NA other upstream 2661383 19321188 ~ 19321859 (-)
znf142 znf142 other upstream 2996477 19655763 ~ 19666201 (-)

Expression


Co-expression Network