Gene
RNA
| Item | Value |
|---|---|
| gene id | G1782678 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 16664602 ~ 16668745 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2041054 | True | 326 | lncRNA | 0.48 | 2 | 16664602 | 16668745 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501503 | tank | coding | downstream | 10458 | 16647894 ~ 16654144 (-) |
| LOC110501502 | tbr1 | coding | downstream | 38028 | 16621825 ~ 16626574 (-) |
| LOC110501500 | LOC106581805 | coding | downstream | 67928 | 16541255 ~ 16596674 (-) |
| LOC110501493 | LOC106581799 | coding | downstream | 575988 | 16045523 ~ 16088614 (-) |
| ttc21b | ttc21b | coding | downstream | 643535 | 16002547 ~ 16021067 (-) |
| LOC110501509 | tanc1 | coding | upstream | 199578 | 16868323 ~ 17049285 (-) |
| LOC110501514 | dapl1 | coding | upstream | 388359 | 17057104 ~ 17063550 (-) |
| LOC110501511 | pkp4 | coding | upstream | 395590 | 17064335 ~ 17178344 (-) |
| LOC110501516 | LOC106586173 | coding | upstream | 565650 | 17234395 ~ 17241046 (-) |
| LOC110501517 | LOC106581816 | coding | upstream | 572963 | 17241708 ~ 17253527 (-) |
| G1782708 | NA | non-coding | downstream | 2396 | 16661997 ~ 16662206 (-) |
| G1782704 | NA | non-coding | downstream | 4797 | 16659300 ~ 16659805 (-) |
| G1782702 | NA | non-coding | downstream | 17077 | 16647337 ~ 16647525 (-) |
| G1782685 | NA | non-coding | downstream | 32273 | 16631934 ~ 16632329 (-) |
| G1782657 | NA | non-coding | downstream | 62626 | 16601653 ~ 16601976 (-) |
| G1782716 | NA | non-coding | upstream | 2763 | 16671508 ~ 16671792 (-) |
| G1782717 | NA | non-coding | upstream | 3351 | 16672096 ~ 16672365 (-) |
| G1782722 | NA | non-coding | upstream | 9794 | 16678539 ~ 16678888 (-) |
| G1782671 | rbms1 | non-coding | upstream | 51569 | 16720314 ~ 16724481 (-) |
| G1782669 | NA | non-coding | upstream | 61933 | 16730678 ~ 16745332 (-) |
| b3galt1b | LOC106581793 | other | downstream | 839388 | 15684423 ~ 15825221 (-) |
| G1781137 | lrp2 | other | downstream | 1096068 | 15567503 ~ 15568534 (-) |
| G1778224 | NA | other | downstream | 3334107 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 3491623 | 13168780 ~ 13172979 (-) |
| LOC110501411 | LOC106581904 | other | downstream | 4039908 | 12620582 ~ 12624860 (-) |
| G1783895 | LOC106581829 | other | upstream | 1200784 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 2506822 | 19175567 ~ 19179266 (-) |
| G1785753 | NA | other | upstream | 2652443 | 19321188 ~ 19321859 (-) |
| znf142 | znf142 | other | upstream | 2987537 | 19655763 ~ 19666201 (-) |
