XLOC_037112 (itgb5)


Basic Information

Item Value
gene id XLOC_037112
gene name itgb5
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 22677503 ~ 22748015 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073058
GTTTAAAGTAATGTGAGGGACGCTGGCAGGACACTCGACTATTGAACTTCCAAGCTGAAAACAACCGGAGGAACGAGGAAAACAGCCTGTTCAATAAGTTTGAAATGTTCGTGCAACTGAAGATTTAAAACCCAGTATGAATGCTGGGCAAGTTGCATTACAGCAGTGGACCTCGGACAGAGAGCGACAGTAACTTCGAGTGTGTGGATTATTGTTACAGGATCACTCGGATTTCACTCATGTGTTTACAGTGCAGATTCGCGCACTGGACACTCACTTCAGTCATGTATGTGCCGCTGTGATTTGGGAAGGATGGACAAAGAGAAGATCTCGGTTACCCGCTGTGGAAGGATGTGGAAACTTTGCTCATCTACACGCCACCCGGCTCTTCTAGTTTGTATAGTGTTAGAAATATTTATTCACAGCGTCAAAGGTCTTAATGTTTGTATGAGCGGCAGCGCCACGTCTTGTGAAGAGTGTCTCCTCATTCACCCGAGCTGCGCCTGGTGCGCGCAAGAGGACTTTGGACAGGCCAGAACACTTACCTCAAGATGTGACTTTAGCCAGAACTTGCAGAAGAGGGGATGCGATGCACCATTTATAGAGAACCCGAGGAGTGGCAGCTCTGTGCTCCAGAGCAAACCCTTGAGCTACAAAGGGTCAGGAGTGACCCAGTATGATGTCATCCAGATATACCCACAGAAGATCTCTCTCAGCTTAAGGCCTGGTGACCAGGCGTCTTTTGAAGTCCAAGTGCGCCCTGTGGA
>TCONS_00073059
GTTTAAAGTAATGTGAGGGACGCTGGCAGGACACTCGACTATTGAACTTCCAAGCTGAAAACAACCGGAGGAACGAGGAAAACAGCCTGTTCAATAAGTTTGAAATGTTCGTGCAACTGAAGATTTAAAACCCAGTATGAATGCTGGGCAAGTTGCATTACAGCAGTGGACCTCGGACAGAGAGCGACAGTAACTTCGAGTGTGTGGATTATTGTTACAGGATCACTCGGATTTCACTCATGTGTTTACAGTGCAGATTCGCGCACTGGACACTCACTTCAGTCATGTATGTGCCGCTGTGATTTGGGAAGGATGGACAAAGAGAAGATCTCGGTTACCCGCTGTGGAAGGATGTGGAAACTTTGCTCATCTACACGCCACCCGGCTCTTCTAGTTTGTATAGTGTTAGAAATATTTATTCACAGCGTCAAAGGTCTTAATGTTTGTATGAGCGGCAGCGCCACGTCTTGTGAAGAGTGTCTCCTCATTCACCCGAGCTGCGCCTGGTGCGCGCAAGAGGACTTTGGACAGGCCAGAACACTTACCTCAAGATGTGACTTTAGCCAGAACTTGCAGAAGAGGGGATGCGATGCACCATTTATAGAGAACCCGAGGAGTGGCAGCTCTGTGCTCCAGAGCAAACCCTTGAGCTACAAAGGGTCAGGAGTGACCCAGTATGATGTCATCCAGATATACCCACAGAAGATCTCTCTCAGCTTAAGGCCTGGTGACCAGGCGTCTTTTGAAGTCCAAGTGCGCCCTGTGGAAGACTATCCTGTTGATTTGTACTACCTCATGGACCTCTCGCTATCCATGAAGGACGATCTGGACACGATCCGCAACCTGGGCACCAAGCTGGCTGAAGAAATGAGGAAGCTCACGAGTAACTTTCGTCTTGGGTTTGGTTCCTTTGTGGACAAGAACATCTCACCCTTCTCCTACACTGCATCCAAGTACCAGGACAACCCATGCAATGGATATAAATTGTTCCCAAACTGCGTCCCAACATTTGGCTTTCGTCACCTCTTGTCTCTTACGGACAAGGTTGATCGTTTCAATGAAGAAGTGCAGAAGCAGATGGTTTCGAGAAACAGGGACGCGCCAGAGGGAGGGTTTGATGCCATTCTTCAGGCTGCAGTTTGCaggGAGAAGATTGGCTGGAGGAAGGAGGCCTATCATCTGCTGGTGTTTGCCACTGATGACGTCCCTCACTTGGCTTTGGATGGTAAACTCGGTGGACTGGTGCATCCTCATGACGGCCAGTGTCACCTGAATGACAAGAATGAGTACAGTGCTTCAACCAAGATGGACTATCCTTCTCTGGCACTGCTTGGAGAAAAACTGGCTGAAAACAATATTTTCCTGATCTTCGCTGTTATAAAAAGACACTACGTTCTTTACAAGAACCTCACTGCGTTGATCCCTGGGACTACAGTGGAAATTTTGGACCAGGACTCCAAAAACATCATTCAACTAATTGTGAATGCCTacaatAACATAAGGTCAAAAGTTGAGCTGAGCGTGTGGGATCATCCTGAAGATCTCAGTCTGGCCTTCTCCGCTACCTGTCAAGATGGACAGCCCCTGACCGGTCTCCGCAAGTGCGCCGACCTCAAAATTGGTGACACTGTCTCCTTCAATGTAACTGTAGACGCTCGAGGATGTCCTCCGAAAGGCACCAGGAAGAGTTTCACCATCAGGCCTGTTGGTTTTAAAGACCGTCTAGAGGTTTCTGTGGATTACCGCTGTGATTGCCGCTGCACGTATCACACAAAGCCGAACAGCAGCCGCTGCAACTCTGCTGGCACTTACAACTGTGGGTTGTGCCGGTGTGAGCCTGGGTATCTGGGAGCCCGCTGCGAGTGCCAGGAGGGTGAGGTGGACCACCAGCACCTCAGTGCCTGTCGAGAAGCAGAGGGCAAGCAGGTGTGCAGTGGTCGTGGAGAATGCAGCTGTAACCAGTGCCTGTGCTATGAGTCAGAGTTTGGCAAGATCTACGGCACCTTCTGCGAATGTGACGACTTCTCCTGTGCCCGACACAAGGGCATACTCTGCTCAgGTCATGGAGAATGCCACTGTGGTGAGTGTAAATGCCATGCCGGTTATATTGGAGACAACTGTAATTGCTCGACGGAAACGGCTTCCTGTGTGTCGGATGATGGCAAGATCTGTAGCGGCCGGGGCAGCTGTGTGTGCGGACGCTGCCAGTGCACTGAACCAGGGGCATTTGGGGACACATGTGAAAAATGTCCCACCTGTCCAGATGCATGTGGAACAAAGAGGGAATGCATCGAGTGTCGTCTTTTTAACACAGGAAGACTGGCTGATAATCAGACCTGTCAGCGCATGTGCAAGGACGAAATCACCACAGTGGAAACCCTCAAAACTGACGATCCCAACGCTGTTCAGTGTGTGTATAAGACTGAGAATGACTGCGTGATGAAGTTTACATACTCTGAACATGCCAATGGACAATCAGTCCTCACCGCTCTTAAAGAGCCAGaatGTGCCGTCGCACCAAATGCTATGACCGTGCTGCTGGCTGTGGTTGGCAGTATCTTGTTGATGGGCATCGTGCTACTGGCTCTCTGGAAACTGGTCATCACTGTTCATGACCGCAGGGAGTTTGCACGCTTTCAAAGTGCACGTTCACGAGCGCGATATGAGATGGCATCTAATCCAGTTTATAAGCGGTCCGTACCAATGGAGACGGATTTCGATATGCATGGTATCAAGTCACTGAACGGAGGAGTCCACTGATTAAACACCATTTGGACTGAGGGACATGGCAGGACCTGTCCGGTGCACATCTGCACTACAGTGGAGCACAGAGATGGGATGGATTTTATGGTCTGATGCAATGAAAACTTTTTGGTGGATTAGTGGTTCATGAGGATTGGAGATAACAGTAATGAAAGTCAATTTATGAGCGGCATTTGGACACATGCTGAATTTGAGAAAAGGATTTTAAGGGCTTGCCCGCTTGACTTCGTGAGCGATGGACATTGACCCACTATGGACCGCTTGCTTGAATATAATTCGTCATTGTCTTCATTTCTAACCGTACCTCCCACACATTATGATGGATTTTGCAGTGCATTCTTTTATAGGCAAAAAGACAAgtgtatattttttaacattgtgCCTTTCCAAGCCGTGACACTTTTTATgggaattaaatatatttacatgtgACATTGTACAGTAGACAtaatagaaaacaaacaaatgcaaactTTACATCAGCTCTTTAATGAAGAGAAGGGTACTAACATGACCAGAGCAATAACGGTCTTAACTCTTTTTTGCACGTTGTTTATTAGGTTGAGGTTTATAAAGTAAAAAAGTCACTCTACAATgaa
>TCONS_00073060
ATTGAACTTCCAAGCTGAAAACAACCGGAGGAACGAGGAAAACAGCCTGTTCAATAAGTTTGAAATGTTCGTGCAACTGAAGATTTAAAACCCAGTATGAATGCTGGGCAAGTTGCATTACAGCAGTGGACCTCGGACAGAGAGCGACAGTAACTTCGAGTGTGTGGATTATTGTTACAGGATCACTCGGATTTCACTCATGTGTTTACAGTGCAGATTCGCGCACTGGACACTCACTTCAGTCATGTATGTGCCGCTGTGATTTGGGAAGGATGGACAAAGAGAAGATCTCGGTTACCCGCTGTGTAAAAATCATATATCTATAATAACTTAGTTTTATACTATTGTACAAAAGGAAAACTACGTTTGGCGCTGAACTGTGTTTGGACTTCGCAGGGAAGGATGTGGAAACTTTGCTCATCTACACGCCACCCGGCTCTTCTAGTTTGTATAGTGTTAGAAATATTTATTCACAGCGTCAAAGGTCTTAATGTTTGTATGAGCGGCAGCGCCACGTCTTGTGAAGAGTGTCTCCTCATTCACCCGAGCTGCGCCTGGTGCGCGCAAGAGGACTTTGGACAGGCCAGAACACTTACCTCAAGATGTGACTTTAGCCAGAACTTGCAGAAGAGGGGATGCGATGCACCATTTATAGAGAACCCGAGGAGTGGCAGCTCTGTGCTCCAGAGCAAACCCTTGAGCTACAAAGGGTCAGGAGTGACCCAGTATGATGTCATCCAGATATACCCACAGAAGATCTCTCTCAGCTTAAGGCCTGGTGACCAGGCGTCTTTTGAAGTCCAAGTGCGCCCTGTGGAAGACTATCCTGTTGATTTGTACTACCTCATGGACCTCTCGCTATCCATGAAGGACGATCTGGACACGATCCGCAACCTGGGCACCAAGCTGGCTGAAGAAATGAGGAAGCTCACGAGTAACTTTCGTCTTGGGTTTGGTTCCTTTGTGGACAAGAACATCTCACCCTTCTCCTACACTGCATCCAAGTACCAGGACAACCCATGCAATGGATATAAATTGTTCCCAAACTGCGTCCCAACATTTGGCTTTCGTCACCTCTTGTCTCTTACGGACAAGGTTGATCGTTTCAATGAAGAAGTGCAGAAGCAGATGGTTTCGAGAAACAGGGACGCGCCAGAGGGAGGGTTTGATGCCATTCTTCAGGCTGCAGTTTGCaggGAGAAGATTGGCTGGAGGAAGGAGGCCTATCATCTGCTGGTGTTTGCCACTGATGACGTCCCTCACTTGGCTTTGGATGGTAAACTCGGTGGACTGGTGCATCCTCATGACGGCCAGTGTCACCTGAATGACAAGAATGAGTACAGTGCTTCAACCAAGATGGACTATCCTTCTCTGGCACTGCTTGGAGAAAAACTGGCTGAAAACAATATTTTCCTGATCTTCGCTGTTATAAAAAGACACTACGTTCTTTACAAGAACCTCACTGCGTTGATCCCTGGGACTACAGTGGAAATTTTGGACCAGGACTCCAAAAACATCATTCAACTAATTGTGAATGCCTacaatAACATAAGGTCAAAAGTTGAGCTGAGCGTGTGGGATCATCCTGAAGATCTCAGTCTGGCCTTCTCCGCTACCTGTCAAGATGGACAGCCCCTGACCGGTCTCCGCAAGTGCGCCGACCTCAAAATTGGTGACACTGTCTCCTTCAATGTAACTGTAGACGCTCGAGGATGTCCTCCGAAAGGCACCAGGAAGAGTTTCACCATCAGGCCTGTTGGTTTTAAAGACCGTCTAGAGGTTTCTGTGGATTACCGCTGTGATTGCCGCTGCACGTATCACACAAAGCCGAACAGCAGCCGCTGCAACTCTGCTGGCACTTACAACTGTGGGTTGTGCCGGTGTGAGCCTGGGTATCTGGGAGCCCGCTGCGAGTGCCAGGAGGGTGAGGTGGACCACCAGCACCTCAGTGCCTGTCGAGAAGCAGAGGGCAAGCAGGTGTGCAGTGGTCGTGGAGAATGCAGCTGTAACCAGTGCCTGTGCTATGAGTCAGAGTTTGGCAAGATCTACGGCACCTTCTGCGAATGTGACGACTTCTCCTGTGCCCGACACAAGGGCATACTCTGCTCAgGTCATGGAGAATGCCACTGTGGTGAGTGTAAATGCCATGCCGGTTATATTGGAGACAACTGTAATTGCTCGACGGAAACGGCTTCCTGTGTGTCGGATGATGGCAAGATCTGTAGCGGCCGGGGCAGCTGTGTGTGCGGACGCTGCCAGTGCACTGAACCAGGGGCATTTGGGGACACATGTGAAAAATGTCCCACCTGTCCAGATGCATGTGGAACAAAGAGGGAATGCATCGAGTGTCGTCTTTTTAACACAGGAAGACTGGCTGATAATCAGACCTGTCAGCGCATGTGCAAGGACGAAATCACCACAGTGGAAACCCTCAAAACTGACGATCCCAACGCTGTTCAGTGTGTGTATAAGACTGAGAATGACTGCGTGATGAAGTTTACATACTCTGAACATGCCAATGGACAATCAGTCCTCACCGCTCTTAAAGAGCCAGaatGTGCCGTCGCACCAAATGCTATGACCGTGCTGCTGGCTGTGGTTGGCAGTATCTTGTTGATGGGCATCGTGCTACTGGCTCTCTGGAAACTGGTCATCACTGTTCATGACCGCAGGGAGTTTGCACGCTTTCAAAGTGCACGTTCACGAGCGCGATATGAGATGGCATCTAATCCAGTTTATAAGCGGTCCGTACCAATGGAGACGGATTTCGATATGCATGGTATCAAGTCACTGAACGGAGGAGTCCACTGATTAAACACCATTTGGACTGAGGGACATGGCAGGACCTGTCCGGTGCACATCTGCACTACAGTGGAGCACAGAGATGGGATGGATTTTATGGTCTGATGCAATGAAAACTTTTTGGTGGATTAGTGGTTCATGAGGATTGGAGATAACAGTAATGAAAGTCAATTTATGAGCGGCATTTGGACACATGCTGAATTTGAGAAAAGGATTTTAAGGGCTTGCCCGCTTGACTTCGTGAGCGATGGACATTGACCCACTATGGACCGCTTGCTTGAATATAATTCGTCATTGTCTTCATTTCTAACCGTACCTCCCACACATTATGATGGATTTTGCAGTGCATTCTTTTATAGGCAAAAAGACAAgtgtatattttttaacattgtgCCTTTCCAAGCCGTGACACTTTTTATgggaattaaatatatttacatgtgACATTGTACAGTAGACAtaatagaaaacaaacaaatgcaaactTTACATCAGCTCTTTAATGAAGAGAAGGGTACTAACATGACCAGAGCAATAACGGTCTTAACTCTTTTTTGCACGTTGTTTATTAGGTTGAGGTTTATAAAGTAAAAAAGTCACTCTACAATgaa
>TCONS_00073061
TGAACTTCCAAGCTGAAAACAACCGGAGGAACGAGGAAAACAGCCTGTTCAATAAGTTTGAAATGTTCGTGCAACTGAAGATTTAAAACCCAGTATGAATGCTGGGCAAGTTGCATTACAGCAGTGGACCTCGGACAGAGAGCGACAGTAACTTCGAGTGTGTGGATTATTGTTACAGGATCACTCGGATTTCACTCATGTGTTTACAGTGCAGATTCGCGCACTGGACACTCACTTCAGTCATGTATGTGCCGCTGTGATTTGGGAAGGATGGACAAAGAGAAGATCTCGGTTACCCGCTGTGTAAAAATCATATATCTATAATAACTTAGTTTTATACTATTGTACAAAAGGAAAACTACGTTTGGCGCTGAACTGTGTTTGGACTTCGCAGGGAAGGATGTGGAAACTTTGCTCATCTACACGCCACCCGGCTCTTCTAGTTTGTATAGTGTTAGAAATATTTATTCACAGCGTCAAAGGTCTTAATGTTTGTATGAGCGGCAGCGCCACGTCTTGTGAAGAGTGTCTCCTCATTCACCCGAGCTGCGCCTGGTGCGCGCAAGAGGACTTTGGACAGGCCAGAACACTTACCTCAAGATGTGACTTTAGCCAGAACTTGCAGAAGAGGGGATGCGATGCACCATTTATAGAGAACCCGAGGAGTGGCAGCTCTGTGCTCCAGAGCAAACCCTTGAGCTACAAAGGGTCAGGAGTGACCCAGTATGATGTCATCCAGATATACCCACAGAAGATCTCTCTCAGCTTAAGGCCTGGTGACCAGGCGTCTTTTGAAGTCCAAGTGCGCCCTGTGGAAGACTATCCTGTTGATTTGTACTACCTCATGGACCTCTCGCTATCCATGAAGGACGATCTGGACACGATCCGCAACCTGGGCACCAAGCTGGCTGAAGAAATGAGGAAGCTCACGAGTAACTTTCGTCTTGGGTTTGGTTCCTTTGTGGACAAGAACATCTCACCCTTCTCCTACACTGCATCCAAGTACCAGGACAACCCATGCAATGGATATAAATTGTTCCCAAACTGCGTCCCAACATTTGGCTTTCGTCACCTCTTGTCTCTTACGGACAAGGTTGATCGTTTCAATGAAGAAGTGCAGAAGCAGATGGTTTCGAGAAACAGGGACGCGCCAGAGGGAGGGTTTGATGCCATTCTTCAGGCTGCAGTTTGCaggGAGAAGATTGGCTGGAGGAAGGAGGCCTATCATCTGCTGGTGTTTGCCACTGATGACGTCCCTCACTTGGCTTTGGATGGTAAACTCGGTGGACTGGTGCATCCTCATGACGGCCAGTGTCACCTGAATGACAAGAATGAGTACAGTGCTTCAACCAAGATGGACTATCCTTCTCTGGCACTGCTTGGAGAAAAACTGGCTGAAAACAATATTTTCCTGATCTTCGCTGTTATAAAAAGACACTACGTTCTTTACAAGAACCTCACTGCGTTGATCCCTGGGACTACAGTGGAAATTTTGGACCAGGACTCCAAAAACATCATTCAACTAATTGTGAATGCCTacaatAACATAAGGTCAAAAGTTGAGCTGAGCGTGTGGGATCATCCTGAAGATCTCAGTCTGGCCTTCTCCGCTACCTGTCAAGATGGACAGCCCCTGACCGGTCTCCGCAAGTGCGCCGACCTCAAAATTGGTGACACTGTCTCCTTCAATGTAACTGTAGACGCTCGAGGATGTCCTCCGAAAGGCACCAGGAAGAGTTTCACCATCAGGCCTGTTGGTTTTAAAGACCGTCTAGAGGTTTCTGTGGATTACCGCTGTGATTGCCGCTGCACGTATCACACAAAGCCGAACAGCAGCCGCTGCAACTCTGCTGGCACTTACAACTGTGGGTTGTGCCGGTGTGAGCCTGGGTATCTGGGAGCCCGCTGCGAGTGCCAGGAGGGTGAGGTGGACCACCAGCACCTCAGTGCCTGTCGAGAAGCAGAGGGCAAGCAGGTGTGCAGTGGTCGTGGAGAATGCAGCTGTAACCAGTGCCTGTGCTATGAGTCAGAGTTTGGCAAGATCTACGGCACCTTCTGCGAATGTGACGACTTCTCCTGTGCCCGACACAAGGGCATACTCTGCTCAggtaagataaaatCAGGTCATGGAGAATGCCACTGTGGTGAGTGTAAATGCCATGCCGGTTATATTGGAGACAACTGTAATTGCTCGACGGAAACGGCTTCCTGTGTGTCGGATGATGGCAAGATCTGTAGCGGCCGGGGCAGCTGTGTGTGCGGACGCTGCCAGTGCACTGAACCAGGGGCATTTGGGGACACATGTGAAAAATGTCCCACCTGTCCAGATGCATGTGGAACAAAGAGGGAATGCATCGAGTGTCGTCTTTTTAACACAGGAAGACTGGCTGATAATCAGACCTGTCAGCGCATGTGCAAGGACGAAATCACCACAGTGGAAACCCTCAAAACTGACGATCCCAACGCTGTTCAGTGTGTGTATAAGACTGAGAATGACTGCGTGATGAAGTTTACATACTCTGAACATGCCAATGGACAATCAGTCCTCACCGCTCTTAAAGAGCCAGaatGTGCCGTCGCACCAAATGCTATGACCGTGCTGCTGGCTGTGGTTGGCAGTATCTTGTTGATGGGCATCGTGCTACTGGCTCTCTGGAAACTGGTCATCACTGTTCATGACCGCAGGGAGTTTGCACGCTTTCAAAGTGCACGTTCACGAGCGCGATATGAGATGGCATCTAATCCAGTTTATAAGCGGTCCGTACCAATGGAGACGGATTTCGATATGCATGGTATCAAGTCACTGAACGGAGGAGTCCACTGATTAAACACCATTTGGACTGAGGGACATGGCAGGACCTGTCCGGTGCACATCTGCACTACAGTGGAGCACAGAGATGGGATGGATTTTATGGTCTGATGCAATGAAAACTTTTTGGTGGATTAGTGGTTCATGAGGATTGGAGATAACAGTAATGAAAGTCAATTTATGAGCGGCATTTGGACACATGCTGAATTTGAGAAAAGGATTTTAAGGGCTTGCCCGCTTGACTTCGTGAGCGATGGACATTGACCCACTATGGACCGCTTGCTTGAATATAATTCGTCATTGTCTTCATTTCTAACCGTACCTCCCACACATTATGATGGATTTTGCAGTGCATTCTTTTATAGGCAAAAAGACAAgtgtatattttttaacattgtgCCTTTCCAAGCCGTGACACTTTTTATgggaattaaatatatttacatgtgACATTGTACAGTAGACAtaatagaaaacaaacaaatgcaaactTTACATCAGCTCTTTAATGAAGAGAAGGGTACTAACATGACCAGAGCAATAACGGTCTTAACTCTTTTTTGCACGTTGTTTATTAGGTTGAGGTTTATAAAGTAAAAAAGTCACTCTACAATgaaa
>TCONS_00073062
AGAACCTCACTGCGTTGATCCCTGGGACTACAGTGGAAATTTTGGACCAGGACTCCAAAAACATCATTCAACTAATTGTGAATGCCTacaatAACATAAGGTCAAAAGTTGAGCTGAGCGTGTGGGATCATCCTGAAGATCTCAGTCTGGCCTTCTCCGCTACCTGTCAAGATGGACAGCCCCTGACCGGTCTCCGCAAGTGCGCCGACCTCAAAATTGGTGACACTGTTAGTACTTTACACTTTACTACACAATGTGTCTTTTCAAATGGGTTAAAAGGGAGCAAAGCTGATCCTGTCTCTCAGTCTGCAACCTGAGTGTTTGATGTGTTGTCTGGCAAGAAGCTGGACTCTTATTTATACTTCTTGGATTGAA

Function

symbol description
itgb5 Predicted to enable integrin binding activity. Predicted to be involved in several processes, including cell adhesion mediated by integrin; cell-matrix adhesion; and integrin-mediated signaling pathway. Predicted to act upstream of or within cell adhesion. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of integrin complex. Predicted to be active in cell surface and focal adhesion. Is expressed in margin. Orthologous to human ITGB5 (integrin subunit beta 5).

GO:

id name namespace
GO:0007229 integrin-mediated signaling pathway biological_process
GO:0016477 cell migration biological_process
GO:0007155 cell adhesion biological_process
GO:0007160 cell-matrix adhesion biological_process
GO:0033627 cell adhesion mediated by integrin biological_process
GO:0005925 focal adhesion cellular_component
GO:0008305 integrin complex cellular_component
GO:0009986 cell surface cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0005178 integrin binding molecular_function

KEGG:

id description
ko04151 PI3K-Akt signaling pathway
ko04512 ECM-receptor interaction
ko04145 Phagosome
ko04510 Focal adhesion
ko04810 Regulation of actin cytoskeleton
ko05205 Proteoglycans in cancer
ko05165 Human papillomavirus infection
ko05410 Hypertrophic cardiomyopathy
ko05412 Arrhythmogenic right ventricular cardiomyopathy
ko05414 Dilated cardiomyopathy
ko04131 Membrane trafficking
ko04515 Cell adhesion molecules

ZFIN:

id description
ZDB-GENE-030131-6022 Predicted to enable integrin binding activity. Predicted to be involved in several processes, including cell adhesion mediated by integrin; cell-matrix adhesion; and integrin-mediated signaling pathway. Predicted to act upstream of or within cell adhesion. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of integrin complex. Predicted to be active in cell surface and focal adhesion. Is expressed in margin. Orthologous to human ITGB5 (integrin subunit beta 5).

Ensembl:

ensembl_id ENSDARG00000012942

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073058 False 767 mRNA 0.49 5 22677503 22679833
TCONS_00073059 False 3362 mRNA 0.48 16 22677503 22748014
TCONS_00073060 False 3413 mRNA 0.47 15 22677543 22748014
TCONS_00073061 False 3427 mRNA 0.47 15 22677545 22748015
TCONS_00073062 True 375 lncRNA 0.45 2 22695633 22697854

Neighbor

gene id symbol gene type direction distance location
XLOC_037111 si:dkey-189g17.2 coding upstream 4677 22656976 ~ 22672826 (+)
XLOC_037109 etv5a coding upstream 28206 22631672 ~ 22649297 (+)
XLOC_037110 NA coding upstream 34818 22642386 ~ 22642685 (+)
XLOC_037107 dgkg coding upstream 58945 22375331 ~ 22618558 (+)
XLOC_037108 BX548053.3 coding upstream 100444 22576945 ~ 22577059 (+)
XLOC_037113 tnfaip6 coding downstream 16220 22764235 ~ 22779813 (+)
XLOC_037114 rif1 coding downstream 32886 22780901 ~ 22802172 (+)
XLOC_037115 tsn coding downstream 181660 22929675 ~ 22939510 (+)
XLOC_037116 NA coding downstream 240926 22988941 ~ 22998060 (+)
XLOC_037117 eaf2 coding downstream 255193 23003208 ~ 23007941 (+)
XLOC_037104 NA non-coding upstream 363886 22312733 ~ 22313617 (+)
XLOC_037095 CR536604.1 non-coding upstream 691507 21984109 ~ 21985996 (+)
XLOC_037089 NA non-coding upstream 911768 21761696 ~ 21765735 (+)
XLOC_037119 CR394542.1 non-coding downstream 298252 23046267 ~ 23046385 (+)
XLOC_037122 NA non-coding downstream 378141 23126156 ~ 23128231 (+)
XLOC_037126 NA non-coding downstream 573819 23321834 ~ 23333979 (+)
XLOC_037127 NA non-coding downstream 615833 23363848 ~ 23456345 (+)

Expression


Co-expression Network