G1782390



Basic Information


Item Value
gene id G1782390
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17006034 ~ 17041673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2040736
atacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgaatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaacttaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccaactgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaagaaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagcctagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatacccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcaccctgaacacaccatctccac

Function


NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2040736 True 942 TUCP 0.41 2 17006034 17041673

Neighbor


gene id symbol gene type direction distance location
LOC110502058 NA coding upstream 141648 16846918 ~ 16864386 (+)
LOC110501510 NA coding upstream 151330 16853656 ~ 16854704 (+)
LOC110501507 baz2b coding upstream 161834 16754322 ~ 16844200 (+)
LOC110501506 cd302 coding upstream 260702 16739540 ~ 16745332 (+)
LOC110501504 NA coding upstream 272748 16668491 ~ 16733286 (+)
LOC110501515 ccdc148 coding downstream 136786 17178459 ~ 17226056 (+)
LOC110501518 acvr1 coding downstream 214207 17255880 ~ 17290932 (+)
LOC110501520 acvr1c coding downstream 260927 17302600 ~ 17331284 (+)
LOC110501521 cytip coding downstream 294784 17336457 ~ 17340925 (+)
LOC110501522 ermn coding downstream 300713 17342386 ~ 17344374 (+)
G1782330 tanc1 non-coding upstream 67701 16935057 ~ 16938333 (+)
G1782284 tanc1 non-coding upstream 135646 16866252 ~ 16870388 (+)
G1782219 NA non-coding upstream 253833 16751905 ~ 16752201 (+)
G1782181 NA non-coding upstream 347705 16658114 ~ 16658329 (+)
G1782177 NA non-coding upstream 355929 16647896 ~ 16650105 (+)
G1782351 dapl1 non-coding downstream 15448 17057121 ~ 17063409 (+)
G1782352 NA non-coding downstream 22708 17064381 ~ 17065424 (+)
G1782356 NA non-coding downstream 33663 17075336 ~ 17075841 (+)
G1782445 NA non-coding downstream 57639 17099312 ~ 17099939 (+)
G1782481 NA non-coding downstream 111627 17153300 ~ 17154438 (+)
G1781813 NA other upstream 732924 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 942633 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 1157439 15839604 ~ 15848595 (+)
G1780575 NA other upstream 1572214 15424711 ~ 15433820 (+)
G1780491 NA other upstream 1658368 15291362 ~ 15347666 (+)
G1783087 NA other downstream 254280 17295953 ~ 17296359 (+)
G1783622 NA other downstream 700084 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 868227 17909900 ~ 17911226 (+)
kalrna LOC106581831 other downstream 1060258 18101519 ~ 18386130 (+)
G1784476 asic4 other downstream 1724646 18766319 ~ 18767140 (+)

Expression



Co-expression Network