G1782487


Basic Information

Item Value
gene id G1782487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17165030 ~ 17165263 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2040839
gttctacctggaaccaaaaaatggttctacctggaaccaaaaagggttccacctggaaccaaaaagggttctcctatggggacagcctaaGAGCGCAGAGGTAGAAGTAAAAACCTACCTCTTGACGGGGTGATGTGGGACTTAATAAAAGTCAGAGGTTAGCCGTGTGGAGAAGCTGAGACCTTGACCACTCAATAGGATGACTTGAAAGGGATTTTCAAATGAGGGAGGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2040839 True 234 lncRNA 0.47 1 17165030 17165263

Neighbor

gene id symbol gene type direction distance location
LOC110502058 NA coding upstream 300644 16846918 ~ 16864386 (+)
LOC110501510 NA coding upstream 310326 16853656 ~ 16854704 (+)
LOC110501507 baz2b coding upstream 320830 16754322 ~ 16844200 (+)
LOC110501506 cd302 coding upstream 419698 16739540 ~ 16745332 (+)
LOC110501504 NA coding upstream 431744 16668491 ~ 16733286 (+)
LOC110501515 ccdc148 coding downstream 13196 17178459 ~ 17226056 (+)
LOC110501518 acvr1 coding downstream 90617 17255880 ~ 17290932 (+)
LOC110501520 acvr1c coding downstream 137337 17302600 ~ 17331284 (+)
LOC110501521 cytip coding downstream 171194 17336457 ~ 17340925 (+)
LOC110501522 ermn coding downstream 177123 17342386 ~ 17344374 (+)
G1782483 NA non-coding upstream 8083 17156328 ~ 17156947 (+)
G1782481 NA non-coding upstream 10592 17153300 ~ 17154438 (+)
G1782482 NA non-coding upstream 10970 17153371 ~ 17154060 (+)
G1782445 NA non-coding upstream 65091 17099312 ~ 17099939 (+)
G1782356 NA non-coding upstream 89189 17075336 ~ 17075841 (+)
G1782491 NA non-coding downstream 5690 17170953 ~ 17171171 (+)
G1782529 NA non-coding downstream 65108 17230371 ~ 17230754 (+)
G1782532 NA non-coding downstream 67618 17232881 ~ 17235607 (+)
G1782530 NA non-coding downstream 75937 17241200 ~ 17242745 (+)
G1783090 NA non-coding downstream 153323 17318586 ~ 17324714 (+)
G1782390 NA other upstream 123357 17006034 ~ 17041673 (+)
G1781813 NA other upstream 891920 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 1101629 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 1316435 15839604 ~ 15848595 (+)
G1780575 NA other upstream 1731210 15424711 ~ 15433820 (+)
G1783087 NA other downstream 130690 17295953 ~ 17296359 (+)
G1783622 NA other downstream 576494 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 744637 17909900 ~ 17911226 (+)
kalrna LOC106581831 other downstream 936668 18101519 ~ 18386130 (+)
G1784476 asic4 other downstream 1601056 18766319 ~ 18767140 (+)

Expression


Co-expression Network