Gene
RNA
| Item | Value |
|---|---|
| gene id | G1783181 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 17375227 ~ 17375513 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2041586 | True | 287 | lncRNA | 0.42 | 1 | 17375227 | 17375513 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501523 | galnt5 | coding | downstream | 17616 | 17348212 ~ 17357611 (-) |
| LOC110501517 | LOC106581816 | coding | downstream | 121700 | 17241708 ~ 17253527 (-) |
| LOC110501516 | LOC106586173 | coding | downstream | 134181 | 17234395 ~ 17241046 (-) |
| LOC110501511 | pkp4 | coding | downstream | 196883 | 17064335 ~ 17178344 (-) |
| LOC110501514 | dapl1 | coding | downstream | 311677 | 17057104 ~ 17063550 (-) |
| LOC110502059 | gpd2 | coding | upstream | 68971 | 17444484 ~ 17486216 (-) |
| LOC110501525 | kcnj3 | coding | upstream | 303375 | 17678888 ~ 17708244 (-) |
| LOC110501526 | LOC106581824 | coding | upstream | 373004 | 17748517 ~ 17815344 (-) |
| fmnl2a | LOC106581828 | coding | upstream | 530545 | 17906058 ~ 17995814 (-) |
| LOC110501531 | LOC106581830 | coding | upstream | 634410 | 18009923 ~ 18087956 (-) |
| G1783140 | NA | non-coding | downstream | 75048 | 17299748 ~ 17300179 (-) |
| G1783139 | NA | non-coding | downstream | 76270 | 17298675 ~ 17298957 (-) |
| G1783086 | NA | non-coding | downstream | 80251 | 17294776 ~ 17294976 (-) |
| G1783081 | acvr1 | non-coding | downstream | 84329 | 17287937 ~ 17290898 (-) |
| G1783045 | NA | non-coding | downstream | 120159 | 17254863 ~ 17255068 (-) |
| G1783185 | NA | non-coding | upstream | 2512 | 17378025 ~ 17378270 (-) |
| G1783221 | NA | non-coding | upstream | 28390 | 17403903 ~ 17404209 (-) |
| G1783325 | NA | non-coding | upstream | 113832 | 17489345 ~ 17489588 (-) |
| G1783354 | NA | non-coding | upstream | 138368 | 17513881 ~ 17514083 (-) |
| G1783391 | NA | non-coding | upstream | 165041 | 17540554 ~ 17540883 (-) |
| b3galt1b | LOC106581793 | other | downstream | 1550013 | 15684423 ~ 15825221 (-) |
| G1781137 | lrp2 | other | downstream | 1806693 | 15567503 ~ 15568534 (-) |
| G1778224 | NA | other | downstream | 4044732 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 4202248 | 13168780 ~ 13172979 (-) |
| G1783895 | LOC106581829 | other | upstream | 494016 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 1800054 | 19175567 ~ 19179266 (-) |
| G1785753 | NA | other | upstream | 1945675 | 19321188 ~ 19321859 (-) |
| znf142 | znf142 | other | upstream | 2280769 | 19655763 ~ 19666201 (-) |
| G1786832 | LOC100136012 | other | upstream | 2970186 | 20345699 ~ 20346014 (-) |
