G1783185



Basic Information


Item Value
gene id G1783185
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17378025 ~ 17378270 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2041590
gcaatgccaagtgtcaacaGGAGTGGAGTAAAGCTCACTGCCAATCGACTATGGAGCAGTGGAAGCacgttctctggaatgatgaatcacgcttcagcatctggtagtccgacagactaatctgggtttggcggatgccaggagaacactacctgccccaatgcagggtgccaaatgtaaagtttggtggaggaggaataatggtctgttgctgtttttcatggttcgacctaggccccttagttc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2041590 True 246 lncRNA 0.50 1 17378025 17378270

Neighbor


gene id symbol gene type direction distance location
LOC110501523 galnt5 coding downstream 20414 17348212 ~ 17357611 (-)
LOC110501517 LOC106581816 coding downstream 124498 17241708 ~ 17253527 (-)
LOC110501516 LOC106586173 coding downstream 136979 17234395 ~ 17241046 (-)
LOC110501511 pkp4 coding downstream 199681 17064335 ~ 17178344 (-)
LOC110501514 dapl1 coding downstream 314475 17057104 ~ 17063550 (-)
LOC110502059 gpd2 coding upstream 66214 17444484 ~ 17486216 (-)
LOC110501525 kcnj3 coding upstream 300618 17678888 ~ 17708244 (-)
LOC110501526 LOC106581824 coding upstream 370247 17748517 ~ 17815344 (-)
fmnl2a LOC106581828 coding upstream 527788 17906058 ~ 17995814 (-)
LOC110501531 LOC106581830 coding upstream 631653 18009923 ~ 18087956 (-)
G1783181 NA non-coding downstream 2512 17375227 ~ 17375513 (-)
G1783140 NA non-coding downstream 77846 17299748 ~ 17300179 (-)
G1783139 NA non-coding downstream 79068 17298675 ~ 17298957 (-)
G1783086 NA non-coding downstream 83049 17294776 ~ 17294976 (-)
G1783081 acvr1 non-coding downstream 87127 17287937 ~ 17290898 (-)
G1783221 NA non-coding upstream 25633 17403903 ~ 17404209 (-)
G1783325 NA non-coding upstream 111075 17489345 ~ 17489588 (-)
G1783354 NA non-coding upstream 135611 17513881 ~ 17514083 (-)
G1783391 NA non-coding upstream 162284 17540554 ~ 17540883 (-)
G1783410 NA non-coding upstream 175282 17553552 ~ 17553820 (-)
b3galt1b LOC106581793 other downstream 1552811 15684423 ~ 15825221 (-)
G1781137 lrp2 other downstream 1809491 15567503 ~ 15568534 (-)
G1778224 NA other downstream 4047530 13279280 ~ 13330495 (-)
G1778140 efnb2 other downstream 4205046 13168780 ~ 13172979 (-)
G1783895 LOC106581829 other upstream 491259 17869529 ~ 17903951 (-)
LOC110501547 LOC106586143 other upstream 1797297 19175567 ~ 19179266 (-)
G1785753 NA other upstream 1942918 19321188 ~ 19321859 (-)
znf142 znf142 other upstream 2278012 19655763 ~ 19666201 (-)
G1786832 LOC100136012 other upstream 2967429 20345699 ~ 20346014 (-)

Expression



Co-expression Network