G1783386


Basic Information

Item Value
gene id G1783386
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17536635 ~ 17536842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2041807
ATACTCTGTGTGAATGGCAGAGAGATCCGAGGCCGAACTTATCCCAGCAGGCAGACATTTAGGGGAAGGCTGTGCCGCCTTTAGGCAGTGTGTGAGTGACAGAACGGGCTCCAACCCAGGATTGAACCCGAGGTCCAGTCAATATTGGGATTGTGCTTCTGGAGCCAAGAAAATCCCAAAACCACAGGGATGTGAGAAGCAGCTGTAT

Function

NR:

description
PREDICTED: uncharacterized protein LOC106571773

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2041807 True 208 lncRNA 0.52 1 17536635 17536842

Neighbor

gene id symbol gene type direction distance location
LOC110501524 LOC106586168 coding upstream 40827 17489320 ~ 17495933 (+)
LOC110501522 ermn coding upstream 192261 17342386 ~ 17344374 (+)
LOC110501521 cytip coding upstream 195710 17336457 ~ 17340925 (+)
LOC110501520 acvr1c coding upstream 205351 17302600 ~ 17331284 (+)
LOC110501518 acvr1 coding upstream 245703 17255880 ~ 17290932 (+)
LOC110501527 LOC106581827 coding downstream 281804 17818646 ~ 17821630 (+)
LOC110501528 LOC106581829 coding downstream 332616 17869458 ~ 17904003 (+)
kalrna LOC106581831 coding downstream 564677 18101519 ~ 18386130 (+)
LOC110501533 LOC106581832 coding downstream 854995 18391837 ~ 18395440 (+)
LOC110501534 cryba2 coding downstream 865039 18401881 ~ 18404554 (+)
G1783336 NA non-coding upstream 35960 17500437 ~ 17500675 (+)
G1783230 NA non-coding upstream 124376 17412018 ~ 17412259 (+)
G1783222 NA non-coding upstream 129960 17406449 ~ 17406675 (+)
G1783220 NA non-coding upstream 132876 17403455 ~ 17403759 (+)
G1783439 NA non-coding downstream 31644 17568486 ~ 17568716 (+)
G1783479 NA non-coding downstream 74483 17611325 ~ 17612165 (+)
G1783548 NA non-coding downstream 109774 17646616 ~ 17646845 (+)
G1783586 kcnj3 non-coding downstream 140564 17677406 ~ 17681101 (+)
G1783620 NA non-coding downstream 199607 17736449 ~ 17739452 (+)
G1783087 NA other upstream 240276 17295953 ~ 17296359 (+)
G1782390 NA other upstream 494962 17006034 ~ 17041673 (+)
G1781813 NA other upstream 1263525 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 1473234 16062757 ~ 16063401 (+)
G1781293 LOC106586198 other upstream 1688040 15839604 ~ 15848595 (+)
G1783622 NA other downstream 204915 17741757 ~ 17742435 (+)
G1783691 LOC106586162 other downstream 373058 17909900 ~ 17911226 (+)
G1784476 asic4 other downstream 1229477 18766319 ~ 18767140 (+)
LOC110501548 LOC106586143 other downstream 1649646 19186076 ~ 19197714 (+)

Expression


Co-expression Network