Gene
RNA
| Item | Value |
|---|---|
| gene id | G1783391 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 17540554 ~ 17540883 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2041812 | True | 330 | lncRNA | 0.36 | 1 | 17540554 | 17540883 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502059 | gpd2 | coding | downstream | 54338 | 17444484 ~ 17486216 (-) |
| LOC110501523 | galnt5 | coding | downstream | 182943 | 17348212 ~ 17357611 (-) |
| LOC110501517 | LOC106581816 | coding | downstream | 287027 | 17241708 ~ 17253527 (-) |
| LOC110501516 | LOC106586173 | coding | downstream | 299508 | 17234395 ~ 17241046 (-) |
| LOC110501511 | pkp4 | coding | downstream | 362210 | 17064335 ~ 17178344 (-) |
| LOC110501525 | kcnj3 | coding | upstream | 138005 | 17678888 ~ 17708244 (-) |
| LOC110501526 | LOC106581824 | coding | upstream | 207634 | 17748517 ~ 17815344 (-) |
| fmnl2a | LOC106581828 | coding | upstream | 365175 | 17906058 ~ 17995814 (-) |
| LOC110501531 | LOC106581830 | coding | upstream | 469040 | 18009923 ~ 18087956 (-) |
| LOC110502115 | LOC106581727 | coding | upstream | 557922 | 18098805 ~ 18100719 (-) |
| G1783354 | NA | non-coding | downstream | 26471 | 17513881 ~ 17514083 (-) |
| G1783325 | NA | non-coding | downstream | 50966 | 17489345 ~ 17489588 (-) |
| G1783221 | NA | non-coding | downstream | 136345 | 17403903 ~ 17404209 (-) |
| G1783185 | NA | non-coding | downstream | 162284 | 17378025 ~ 17378270 (-) |
| G1783181 | NA | non-coding | downstream | 165041 | 17375227 ~ 17375513 (-) |
| G1783410 | NA | non-coding | upstream | 12669 | 17553552 ~ 17553820 (-) |
| G1783513 | NA | non-coding | upstream | 70320 | 17611203 ~ 17612401 (-) |
| G1783903 | LOC106581827 | non-coding | upstream | 277773 | 17818656 ~ 17821571 (-) |
| G1784633 | NA | non-coding | upstream | 512511 | 18053394 ~ 18053684 (-) |
| LOC110501514 | dapl1 | other | downstream | 477106 | 17057104 ~ 17063550 (-) |
| b3galt1b | LOC106581793 | other | downstream | 1715340 | 15684423 ~ 15825221 (-) |
| G1781137 | lrp2 | other | downstream | 1972020 | 15567503 ~ 15568534 (-) |
| G1778224 | NA | other | downstream | 4210059 | 13279280 ~ 13330495 (-) |
| G1778140 | efnb2 | other | downstream | 4367575 | 13168780 ~ 13172979 (-) |
| G1783895 | LOC106581829 | other | upstream | 328646 | 17869529 ~ 17903951 (-) |
| LOC110501547 | LOC106586143 | other | upstream | 1634684 | 19175567 ~ 19179266 (-) |
| G1785753 | NA | other | upstream | 1780305 | 19321188 ~ 19321859 (-) |
| znf142 | znf142 | other | upstream | 2115399 | 19655763 ~ 19666201 (-) |
| G1786832 | LOC100136012 | other | upstream | 2804816 | 20345699 ~ 20346014 (-) |
