G1783695


Basic Information

Item Value
gene id G1783695
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17835042 ~ 17835304 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2042129
gatctgtgcctcgacacaatcctgtctcggagctctacagacaattcctttgacctcatggcttggtttttgctctgacatgcactgtcaacggtgggaccttatatagacaggtgtgtgcctttccaaatcatgccaaTCAATTTCATTTACCATTTagagatgtagaaacatctcaaggacgatcaatggaaacaggacgcacctgagctcaatttagagtcgcataacaaaggatctgaatacttatgtaaataccaTAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2042129 True 263 lncRNA 0.42 1 17835042 17835304

Neighbor

gene id symbol gene type direction distance location
LOC110501527 LOC106581827 coding upstream 13412 17818646 ~ 17821630 (+)
LOC110501524 LOC106586168 coding upstream 339234 17489320 ~ 17495933 (+)
LOC110501522 ermn coding upstream 490668 17342386 ~ 17344374 (+)
LOC110501521 cytip coding upstream 494117 17336457 ~ 17340925 (+)
LOC110501520 acvr1c coding upstream 503758 17302600 ~ 17331284 (+)
LOC110501528 LOC106581829 coding downstream 34154 17869458 ~ 17904003 (+)
kalrna LOC106581831 coding downstream 266215 18101519 ~ 18386130 (+)
LOC110501533 LOC106581832 coding downstream 556533 18391837 ~ 18395440 (+)
LOC110501534 cryba2 coding downstream 566577 18401881 ~ 18404554 (+)
LOC110501535 LOC106581833 coding downstream 571405 18406709 ~ 18410510 (+)
G1783694 NA non-coding upstream 188 17834585 ~ 17834854 (+)
G1783620 NA non-coding upstream 95590 17736449 ~ 17739452 (+)
G1783586 kcnj3 non-coding upstream 153941 17677406 ~ 17681101 (+)
G1783548 NA non-coding upstream 188197 17646616 ~ 17646845 (+)
G1783696 NA non-coding downstream 56 17835360 ~ 17836209 (+)
G1783701 NA non-coding downstream 8176 17843480 ~ 17843789 (+)
G1783704 NA non-coding downstream 14013 17849317 ~ 17849549 (+)
G1783705 NA non-coding downstream 14303 17849607 ~ 17849811 (+)
G1783706 NA non-coding downstream 14589 17849893 ~ 17884979 (+)
G1783622 NA other upstream 92607 17741757 ~ 17742435 (+)
G1783087 NA other upstream 538683 17295953 ~ 17296359 (+)
G1782390 NA other upstream 793369 17006034 ~ 17041673 (+)
G1781813 NA other upstream 1561932 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 1771641 16062757 ~ 16063401 (+)
G1783691 LOC106586162 other downstream 74596 17909900 ~ 17911226 (+)
G1784476 asic4 other downstream 931015 18766319 ~ 18767140 (+)
LOC110501548 LOC106586143 other downstream 1351184 19186076 ~ 19197714 (+)
ybey ybey other downstream 1735276 19570580 ~ 19572946 (+)

Expression


Co-expression Network