G1783705


Basic Information

Item Value
gene id G1783705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 17849607 ~ 17849811 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2042139
cctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaacattttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaactt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2042139 True 205 lncRNA 0.44 1 17849607 17849811

Neighbor

gene id symbol gene type direction distance location
LOC110501527 LOC106581827 coding upstream 27977 17818646 ~ 17821630 (+)
LOC110501524 LOC106586168 coding upstream 353799 17489320 ~ 17495933 (+)
LOC110501522 ermn coding upstream 505233 17342386 ~ 17344374 (+)
LOC110501521 cytip coding upstream 508682 17336457 ~ 17340925 (+)
LOC110501520 acvr1c coding upstream 518323 17302600 ~ 17331284 (+)
LOC110501528 LOC106581829 coding downstream 19647 17869458 ~ 17904003 (+)
kalrna LOC106581831 coding downstream 251708 18101519 ~ 18386130 (+)
LOC110501533 LOC106581832 coding downstream 542026 18391837 ~ 18395440 (+)
LOC110501534 cryba2 coding downstream 552070 18401881 ~ 18404554 (+)
LOC110501535 LOC106581833 coding downstream 556898 18406709 ~ 18410510 (+)
G1783704 NA non-coding upstream 58 17849317 ~ 17849549 (+)
G1783701 NA non-coding upstream 5818 17843480 ~ 17843789 (+)
G1783696 NA non-coding upstream 13398 17835360 ~ 17836209 (+)
G1783695 NA non-coding upstream 14303 17835042 ~ 17835304 (+)
G1783694 NA non-coding upstream 14753 17834585 ~ 17834854 (+)
G1783706 NA non-coding downstream 82 17849893 ~ 17884979 (+)
G1784020 LOC106581830 non-coding downstream 191697 18041508 ~ 18041753 (+)
G1784021 NA non-coding downstream 192126 18041937 ~ 18042136 (+)
G1784031 NA non-coding downstream 202478 18052289 ~ 18052600 (+)
G1784033 NA non-coding downstream 206859 18056670 ~ 18056875 (+)
G1783622 NA other upstream 107172 17741757 ~ 17742435 (+)
G1783087 NA other upstream 553248 17295953 ~ 17296359 (+)
G1782390 NA other upstream 807934 17006034 ~ 17041673 (+)
G1781813 NA other upstream 1576497 16272389 ~ 16273110 (+)
G1781423 LOC106581799 other upstream 1786206 16062757 ~ 16063401 (+)
G1783691 LOC106586162 other downstream 60089 17909900 ~ 17911226 (+)
G1784476 asic4 other downstream 916508 18766319 ~ 18767140 (+)
LOC110501548 LOC106586143 other downstream 1336677 19186076 ~ 19197714 (+)
ybey ybey other downstream 1720769 19570580 ~ 19572946 (+)

Expression


Co-expression Network