G1784459


Basic Information

Item Value
gene id G1784459
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 18732234 ~ 18732519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2042926
ggcatcctgggacagccccttttctgcaattccgaataaaacccaactttgagaaattctcaagtagaccatgtttctctcaatcacgggagtacaaaggttgcagaccattgctgaatcttttaaccataccacgtggttaaactgttagactatcgataccgaaagaataagaacaagtctttgatattaattactagtctgcagctaggaattcagtatcattgaacgcgaagaacaaCAACCgacgaaacatccattctacaacaacatgaatgaatgtcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2042926 True 286 lncRNA 0.40 1 18732234 18732519

Neighbor

gene id symbol gene type direction distance location
LOC110501537 LOC106581838 coding upstream 122706 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 321724 18406709 ~ 18410510 (+)
LOC110501534 cryba2 coding upstream 327680 18401881 ~ 18404554 (+)
LOC110501533 LOC106581832 coding upstream 336794 18391837 ~ 18395440 (+)
kalrna LOC106581831 coding upstream 346104 18101519 ~ 18386130 (+)
LOC110502061 LOC106586148 coding downstream 207435 18939954 ~ 18951668 (+)
LOC110502062 NA coding downstream 254504 18987023 ~ 18988418 (+)
stat4 stat4 coding downstream 349169 19081688 ~ 19115216 (+)
stat1b LOC106586142 coding downstream 401215 19133734 ~ 19173341 (+)
LOC110501548 LOC106586143 coding downstream 453557 19186076 ~ 19197714 (+)
G1784458 NA non-coding upstream 826 18731169 ~ 18731408 (+)
G1784381 NA non-coding upstream 118043 18611284 ~ 18614191 (+)
G1784035 LOC106581830 non-coding upstream 673098 18058334 ~ 18059136 (+)
G1784034 NA non-coding upstream 674107 18057916 ~ 18058127 (+)
G1784033 NA non-coding upstream 675359 18056670 ~ 18056875 (+)
G1784460 NA non-coding downstream 1037 18733556 ~ 18733779 (+)
G1784466 NA non-coding downstream 9436 18741955 ~ 18742191 (+)
G1784477 NA non-coding downstream 37248 18769767 ~ 18770058 (+)
G1784602 NA non-coding downstream 212817 18945336 ~ 18945542 (+)
G1783691 LOC106586162 other upstream 821008 17909900 ~ 17911226 (+)
G1783622 NA other upstream 989799 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1435875 17295953 ~ 17296359 (+)
G1782390 NA other upstream 1690561 17006034 ~ 17041673 (+)
G1784476 asic4 other downstream 33800 18766319 ~ 18767140 (+)
ybey ybey other downstream 838061 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 884476 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 928590 19661109 ~ 19661926 (+)

Expression


Co-expression Network