G1784477


Basic Information

Item Value
gene id G1784477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 18769767 ~ 18770058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2042947
catcacaacaatccAAAGAAATGGCATTGTGACGAtagtaatgaataatgtggaaattgctTGGAGTAaacctggattgtaaactgtcatggtcaaaacatattgatacaacagtagctaagatggggagaagtctgtccggacataaagcactgctctgcattcttaacaacactatcaacaaggcaggtcctacaggcacctggactactgttcagtcgtgtggtcaggtgccacaaagagggacttgggaaaattgcaattggctcagaacagggcagcacaattggcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2042947 True 292 lncRNA 0.44 1 18769767 18770058

Neighbor

gene id symbol gene type direction distance location
LOC110501537 LOC106581838 coding upstream 160239 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 359257 18406709 ~ 18410510 (+)
LOC110501534 cryba2 coding upstream 365213 18401881 ~ 18404554 (+)
LOC110501533 LOC106581832 coding upstream 374327 18391837 ~ 18395440 (+)
kalrna LOC106581831 coding upstream 383637 18101519 ~ 18386130 (+)
LOC110502061 LOC106586148 coding downstream 169896 18939954 ~ 18951668 (+)
LOC110502062 NA coding downstream 216965 18987023 ~ 18988418 (+)
stat4 stat4 coding downstream 311630 19081688 ~ 19115216 (+)
stat1b LOC106586142 coding downstream 363676 19133734 ~ 19173341 (+)
LOC110501548 LOC106586143 coding downstream 416018 19186076 ~ 19197714 (+)
G1784466 NA non-coding upstream 27576 18741955 ~ 18742191 (+)
G1784460 NA non-coding upstream 35988 18733556 ~ 18733779 (+)
G1784459 NA non-coding upstream 37248 18732234 ~ 18732519 (+)
G1784458 NA non-coding upstream 38359 18731169 ~ 18731408 (+)
G1784381 NA non-coding upstream 155576 18611284 ~ 18614191 (+)
G1784602 NA non-coding downstream 175278 18945336 ~ 18945542 (+)
G1784604 NA non-coding downstream 180098 18950156 ~ 18950523 (+)
G1784606 NA non-coding downstream 183240 18953298 ~ 18954252 (+)
G1785242 NA non-coding downstream 209835 18979893 ~ 18980093 (+)
G1784476 asic4 other upstream 2627 18766319 ~ 18767140 (+)
G1783691 LOC106586162 other upstream 858541 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1027332 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1473408 17295953 ~ 17296359 (+)
ybey ybey other downstream 800522 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 846937 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 891051 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1510955 20269646 ~ 20281952 (+)

Expression


Co-expression Network