G1784604


Basic Information

Item Value
gene id G1784604
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 18950156 ~ 18950523 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2043075
GAGTTGTCAAATATTACAACAATAACCATCTACTCTAAATGGGTCAGGTTAACGCATTCTCCAACACTTGGTACCTAAGGGTTTGCAAGGCGATTTTTTTGATGCTCATTAAAAATCCATCCATGAGCGTTACTGCCAAATGCACTGCATCAATCATTATATTCATGTAGATTACATAGCTCAGATACTTTAGTGCGGCTTCAAACCAGAGGCCAAATCACTGTAAATGTTTGAGTGCAACACTCAGAAATCCTGCTTTACACACTCAGGGTCGAGTCCTAACTTCCACTTAATTCAAATTCTCACTTCGTCTCCCAATGACATCAAAATGCATGACTATAAAGTGAAAATTCTACTGAAGTGGAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2043075 True 368 lncRNA 0.39 1 18950156 18950523

Neighbor

gene id symbol gene type direction distance location
LOC110501537 LOC106581838 coding upstream 340628 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 539646 18406709 ~ 18410510 (+)
LOC110501534 cryba2 coding upstream 545602 18401881 ~ 18404554 (+)
LOC110501533 LOC106581832 coding upstream 554716 18391837 ~ 18395440 (+)
kalrna LOC106581831 coding upstream 564026 18101519 ~ 18386130 (+)
LOC110502062 NA coding downstream 36500 18987023 ~ 18988418 (+)
stat4 stat4 coding downstream 131165 19081688 ~ 19115216 (+)
stat1b LOC106586142 coding downstream 183211 19133734 ~ 19173341 (+)
LOC110501548 LOC106586143 coding downstream 235553 19186076 ~ 19197714 (+)
LOC110501549 LOC106581842 coding downstream 249616 19200139 ~ 19213143 (+)
G1784602 NA non-coding upstream 4614 18945336 ~ 18945542 (+)
LOC110502061 LOC106586148 non-coding upstream 7940 18939954 ~ 18951668 (+)
G1784477 NA non-coding upstream 180098 18769767 ~ 18770058 (+)
G1784466 NA non-coding upstream 207965 18741955 ~ 18742191 (+)
G1784460 NA non-coding upstream 216377 18733556 ~ 18733779 (+)
G1784606 NA non-coding downstream 2775 18953298 ~ 18954252 (+)
G1785242 NA non-coding downstream 29370 18979893 ~ 18980093 (+)
G1785250 NA non-coding downstream 34284 18984807 ~ 18985033 (+)
G1785257 NA non-coding downstream 38573 18989096 ~ 18989796 (+)
G1785312 NA non-coding downstream 96295 19046818 ~ 19047236 (+)
G1784476 asic4 other upstream 183016 18766319 ~ 18767140 (+)
G1783691 LOC106586162 other upstream 1038930 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1207721 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1653797 17295953 ~ 17296359 (+)
ybey ybey other downstream 620057 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 666472 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 710586 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1330490 20269646 ~ 20281952 (+)

Expression


Co-expression Network