Gene
RNA
| Item | Value |
|---|---|
| gene id | G1784606 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 18953298 ~ 18954252 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mannose-1-phosphate guanyltransferase alpha-A-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2043078 | True | 935 | lncRNA | 0.36 | 2 | 18953298 | 18954252 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502061 | LOC106586148 | coding | upstream | 1630 | 18939954 ~ 18951668 (+) |
| LOC110501537 | LOC106581838 | coding | upstream | 343770 | 18596378 ~ 18609528 (+) |
| LOC110501535 | LOC106581833 | coding | upstream | 542788 | 18406709 ~ 18410510 (+) |
| LOC110501534 | cryba2 | coding | upstream | 548744 | 18401881 ~ 18404554 (+) |
| LOC110501533 | LOC106581832 | coding | upstream | 557858 | 18391837 ~ 18395440 (+) |
| LOC110502062 | NA | coding | downstream | 32771 | 18987023 ~ 18988418 (+) |
| stat4 | stat4 | coding | downstream | 127436 | 19081688 ~ 19115216 (+) |
| stat1b | LOC106586142 | coding | downstream | 179482 | 19133734 ~ 19173341 (+) |
| LOC110501548 | LOC106586143 | coding | downstream | 231824 | 19186076 ~ 19197714 (+) |
| LOC110501549 | LOC106581842 | coding | downstream | 245887 | 19200139 ~ 19213143 (+) |
| G1784604 | NA | non-coding | upstream | 2775 | 18950156 ~ 18950523 (+) |
| G1784602 | NA | non-coding | upstream | 7756 | 18945336 ~ 18945542 (+) |
| G1784477 | NA | non-coding | upstream | 183240 | 18769767 ~ 18770058 (+) |
| G1784466 | NA | non-coding | upstream | 211107 | 18741955 ~ 18742191 (+) |
| G1785242 | NA | non-coding | downstream | 25641 | 18979893 ~ 18980093 (+) |
| G1785250 | NA | non-coding | downstream | 30555 | 18984807 ~ 18985033 (+) |
| G1785257 | NA | non-coding | downstream | 34844 | 18989096 ~ 18989796 (+) |
| G1785312 | NA | non-coding | downstream | 92566 | 19046818 ~ 19047236 (+) |
| G1785317 | NA | non-coding | downstream | 102071 | 19056323 ~ 19056541 (+) |
| G1784476 | asic4 | other | upstream | 186158 | 18766319 ~ 18767140 (+) |
| kalrna | LOC106581831 | other | upstream | 730572 | 18101519 ~ 18386130 (+) |
| G1783691 | LOC106586162 | other | upstream | 1042072 | 17909900 ~ 17911226 (+) |
| G1783622 | NA | other | upstream | 1210863 | 17741757 ~ 17742435 (+) |
| G1783087 | NA | other | upstream | 1656939 | 17295953 ~ 17296359 (+) |
| ybey | ybey | other | downstream | 616328 | 19570580 ~ 19572946 (+) |
| LOC110501568 | cnot9 | other | downstream | 662743 | 19603742 ~ 19627954 (+) |
| G1785947 | znf142 | other | downstream | 706857 | 19661109 ~ 19661926 (+) |
| asb1 | asb1 | other | downstream | 1326761 | 20269646 ~ 20281952 (+) |
