G1785322


Basic Information

Item Value
gene id G1785322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19060669 ~ 19061014 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2043846
ccttcgcttccttgggcacagggactatggtggtctgcttgtaacatgtaggtattacagactcagtcagggagaggttgaaaatgtcagtgaagacacttgccagttggtccgcgcatgctttgagtacacgtcctggtaatccatctggccactcgactttgtgaatgttgacctgtttaaaagtcttgctCACTACCGAGATCGTTATCAcatagtcatccagaacagctggtgctctcatgcatgcttcagtgttgcttgcctcgaagcgagcataaaaggtatttagctcgtctggtaggcttgtgtaactgggcagcttgcgtctgggtttcctttgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2043846 True 346 lncRNA 0.49 1 19060669 19061014

Neighbor

gene id symbol gene type direction distance location
LOC110502062 NA coding upstream 72251 18987023 ~ 18988418 (+)
LOC110502061 LOC106586148 coding upstream 109001 18939954 ~ 18951668 (+)
LOC110501537 LOC106581838 coding upstream 451141 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 650159 18406709 ~ 18410510 (+)
LOC110501534 cryba2 coding upstream 656115 18401881 ~ 18404554 (+)
stat4 stat4 coding downstream 20674 19081688 ~ 19115216 (+)
stat1b LOC106586142 coding downstream 72720 19133734 ~ 19173341 (+)
LOC110501548 LOC106586143 coding downstream 125062 19186076 ~ 19197714 (+)
LOC110501549 LOC106581842 coding downstream 139125 19200139 ~ 19213143 (+)
LOC110501551 wdr75 coding downstream 169014 19230028 ~ 19256910 (+)
G1785321 NA non-coding upstream 148 19060311 ~ 19060521 (+)
G1785320 NA non-coding upstream 999 19059399 ~ 19059670 (+)
G1785317 NA non-coding upstream 4128 19056323 ~ 19056541 (+)
G1785312 NA non-coding upstream 13433 19046818 ~ 19047236 (+)
G1785257 NA non-coding upstream 70873 18989096 ~ 18989796 (+)
G1785329 NA non-coding downstream 9153 19070167 ~ 19070391 (+)
G1785299 NA non-coding downstream 51553 19112567 ~ 19126980 (+)
G1785358 NA non-coding downstream 71960 19132974 ~ 19133324 (+)
G1785363 NA non-coding downstream 77575 19138589 ~ 19181946 (+)
G1785365 NA non-coding downstream 79769 19140783 ~ 19183494 (+)
G1784476 asic4 other upstream 293529 18766319 ~ 18767140 (+)
kalrna LOC106581831 other upstream 837943 18101519 ~ 18386130 (+)
G1783691 LOC106586162 other upstream 1149443 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1318234 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1764310 17295953 ~ 17296359 (+)
ybey ybey other downstream 509566 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 555981 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 600095 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1219999 20269646 ~ 20281952 (+)

Expression


Co-expression Network