G1785358


Basic Information

Item Value
gene id G1785358
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19132974 ~ 19133324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2043882
ttctttttactttttggattatgtgtgtattgtatttttttgttgtttctaGGCATTATTACTGCACTGTGGAAGCTGGAGAAAAAAAGCAGAATTTTAGTACATTTCGTTCTATAGGCTTTTGTCAAGAAGGGACACACATTTTCGTAGGAGGTTTAGGAGAACGTACACAGCAGGTTAGGTTATTAACGTAGCAGGCAAGTATAATTAGGTTAAGATTAGATAAAGGGTTAGGGATTGCGAAAAATAATAATGAAACAATTAAATAATTTACGTCATATATGACAGCAGCTGTATCCCATCTAGTCATTGCCTTTTTATAGTATGTTTCCTATCAGAGGCTCCTTCTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2043882 True 351 lncRNA 0.34 1 19132974 19133324

Neighbor

gene id symbol gene type direction distance location
stat4 stat4 coding upstream 17758 19081688 ~ 19115216 (+)
LOC110502062 NA coding upstream 144556 18987023 ~ 18988418 (+)
LOC110502061 LOC106586148 coding upstream 181306 18939954 ~ 18951668 (+)
LOC110501537 LOC106581838 coding upstream 523446 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 722464 18406709 ~ 18410510 (+)
stat1b LOC106586142 coding downstream 410 19133734 ~ 19173341 (+)
LOC110501548 LOC106586143 coding downstream 52752 19186076 ~ 19197714 (+)
LOC110501549 LOC106581842 coding downstream 66815 19200139 ~ 19213143 (+)
LOC110501551 wdr75 coding downstream 96704 19230028 ~ 19256910 (+)
LOC110501555 asnsd1 coding downstream 169055 19302379 ~ 19308366 (+)
G1785299 NA non-coding upstream 5994 19112567 ~ 19126980 (+)
G1785329 NA non-coding upstream 62583 19070167 ~ 19070391 (+)
G1785322 NA non-coding upstream 71960 19060669 ~ 19061014 (+)
G1785321 NA non-coding upstream 72453 19060311 ~ 19060521 (+)
G1785320 NA non-coding upstream 73304 19059399 ~ 19059670 (+)
G1785363 NA non-coding downstream 5265 19138589 ~ 19181946 (+)
G1785365 NA non-coding downstream 7459 19140783 ~ 19183494 (+)
G1785379 NA non-coding downstream 124707 19258031 ~ 19259223 (+)
G1785375 slc40a1 non-coding downstream 127317 19260641 ~ 19265142 (+)
G1784476 asic4 other upstream 365834 18766319 ~ 18767140 (+)
kalrna LOC106581831 other upstream 910248 18101519 ~ 18386130 (+)
G1783691 LOC106586162 other upstream 1221748 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1390539 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1836615 17295953 ~ 17296359 (+)
ybey ybey other downstream 437256 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 483671 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 527785 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1147689 20269646 ~ 20281952 (+)

Expression


Co-expression Network