G1785365


Basic Information

Item Value
gene id G1785365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19140783 ~ 19183494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2043890
gtgtcatctgatgaagatcatcaaaggttagtgattcattttatctcggTAACGCGACcaatcccggagaagctggcgggagccccggggagagttctcttttctttgtgaagggcagggcgccctggaatgggttcgccccgagagaggggcccaagccctggaaaacGTTGCGGTTCcagcggcgtccggtgagctctcattggcccttgaaaatccgggggagaacCCAACCCCTCACCGATCCGCCTTCGGCCCGTCGGCGAA

Function

NR:

description
serine/arginine repetitive matrix protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2043890 True 267 lncRNA 0.59 2 19140783 19183494

Neighbor

gene id symbol gene type direction distance location
stat4 stat4 coding upstream 25567 19081688 ~ 19115216 (+)
LOC110502062 NA coding upstream 152365 18987023 ~ 18988418 (+)
LOC110502061 LOC106586148 coding upstream 189115 18939954 ~ 18951668 (+)
LOC110501537 LOC106581838 coding upstream 531255 18596378 ~ 18609528 (+)
LOC110501535 LOC106581833 coding upstream 730273 18406709 ~ 18410510 (+)
LOC110501548 LOC106586143 coding downstream 2582 19186076 ~ 19197714 (+)
LOC110501549 LOC106581842 coding downstream 16645 19200139 ~ 19213143 (+)
LOC110501551 wdr75 coding downstream 46534 19230028 ~ 19256910 (+)
LOC110501555 asnsd1 coding downstream 118885 19302379 ~ 19308366 (+)
asnsd1 asnsd1 coding downstream 124428 19307922 ~ 19311501 (+)
G1785358 NA non-coding upstream 7459 19132974 ~ 19133324 (+)
G1785299 NA non-coding upstream 13803 19112567 ~ 19126980 (+)
G1785329 NA non-coding upstream 70392 19070167 ~ 19070391 (+)
G1785322 NA non-coding upstream 79769 19060669 ~ 19061014 (+)
G1785321 NA non-coding upstream 80262 19060311 ~ 19060521 (+)
G1785379 NA non-coding downstream 74537 19258031 ~ 19259223 (+)
G1785375 slc40a1 non-coding downstream 77147 19260641 ~ 19265142 (+)
G1785412 NA non-coding downstream 96231 19279725 ~ 19279935 (+)
G1785413 NA non-coding downstream 96982 19280476 ~ 19282878 (+)
G1784476 asic4 other upstream 373643 18766319 ~ 18767140 (+)
kalrna LOC106581831 other upstream 918057 18101519 ~ 18386130 (+)
G1783691 LOC106586162 other upstream 1229557 17909900 ~ 17911226 (+)
G1783622 NA other upstream 1398348 17741757 ~ 17742435 (+)
G1783087 NA other upstream 1844424 17295953 ~ 17296359 (+)
ybey ybey other downstream 387086 19570580 ~ 19572946 (+)
LOC110501568 cnot9 other downstream 433501 19603742 ~ 19627954 (+)
G1785947 znf142 other downstream 477615 19661109 ~ 19661926 (+)
asb1 asb1 other downstream 1097519 20269646 ~ 20281952 (+)

Expression


Co-expression Network