G1785752 (ankar)


Basic Information

Item Value
gene id G1785752
gene name ankar
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19319492 ~ 19319839 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2044317
CATGGCCCAGGGGACACAACTTAAAGTACATGAATATAAAATGCTCAAGAATTCCATAAGCATATTTAAAAATGAGGGAAACAATGATTTGACTTGCTCAGGTCCTACCTTTAAGAGTCGTAGGAGGTGCTTGGCGGCCGACTTCTTCAGAAAGCGGGCCTGAATGGCAGGGTTGTGATCAGCGATGGCCTCCAGGGCTCTGGCTGCCGTCACCTGCGCGGCTATCTTCCTCCCCCGCAGTATGAGCACCAACGGGGCCACGGCGCCCACTCCACAGATGGTGTCCTGGTTCTCCCGGTGTCCCTTAGCCAGCTCAGCCAGAGCCGCACACACCTCCTCTTGCAACAC

Function

symbol description
ankar Orthologous to human ANKAR (ankyrin and armadillo repeat containing).

NR:

description
ankyrin and armadillo repeat-containing protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2044317 True 348 lncRNA 0.55 1 19319492 19319839

Neighbor

gene id symbol gene type direction distance location
zgc:136439 LOC106581848 coding downstream 5764 19311289 ~ 19313728 (-)
slc40a1 slc40a1 coding downstream 39980 19260461 ~ 19279512 (-)
LOC110501550 LOC106581842 coding downstream 89624 19217104 ~ 19229868 (-)
LOC110501547 LOC106586143 coding downstream 140226 19175567 ~ 19179266 (-)
LOC110501543 LOC106581841 coding downstream 282983 19034465 ~ 19036509 (-)
osgepl1 osgepl1 coding upstream 3166 19323005 ~ 19330646 (-)
ormdl1 ormdl1 coding upstream 18913 19338752 ~ 19345840 (-)
mstnb LOC100135919 coding upstream 119357 19439196 ~ 19442706 (-)
LOC110501563 NA coding upstream 203222 19523061 ~ 19525499 (-)
lss lss coding upstream 210559 19530398 ~ 19544185 (-)
G1785748 NA non-coding downstream 27904 19291367 ~ 19291588 (-)
G1785745 NA non-coding downstream 35113 19284031 ~ 19284379 (-)
G1785744 NA non-coding downstream 35514 19283131 ~ 19283978 (-)
G1785742 NA non-coding downstream 36834 19281007 ~ 19282658 (-)
G1785743 NA non-coding downstream 38564 19280485 ~ 19280928 (-)
G1785857 NA non-coding upstream 166289 19486128 ~ 19486335 (-)
G1785861 NA non-coding upstream 170680 19490519 ~ 19490733 (-)
G1786379 NA non-coding upstream 366651 19686490 ~ 19687169 (-)
G1786380 NA non-coding upstream 367926 19687765 ~ 19688406 (-)
G1786566 NA non-coding upstream 654481 19974320 ~ 19974561 (-)
G1783895 LOC106581829 other downstream 1415541 17869529 ~ 17903951 (-)
LOC110501514 dapl1 other downstream 2256044 17057104 ~ 17063550 (-)
b3galt1b LOC106581793 other downstream 3494278 15684423 ~ 15825221 (-)
G1781137 lrp2 other downstream 3750958 15567503 ~ 15568534 (-)
G1785753 NA other upstream 1349 19321188 ~ 19321859 (-)
znf142 znf142 other upstream 336443 19655763 ~ 19666201 (-)
G1786832 LOC100136012 other upstream 1025860 20345699 ~ 20346014 (-)
G1787166 NA other upstream 1070677 20390516 ~ 20455983 (-)
LOC110501594 LOC106581696 other upstream 2470917 21788428 ~ 21913721 (-)

Expression


Co-expression Network