Gene
RNA
| Item | Value |
|---|---|
| gene id | G1786379 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 19686490 ~ 19687169 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2044997 | True | 680 | lncRNA | 0.37 | 1 | 19686490 | 19687169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| znf142 | znf142 | coding | downstream | 20289 | 19655763 ~ 19666201 (-) |
| LOC110501567 | usp37 | coding | downstream | 82932 | 19572445 ~ 19603558 (-) |
| LOC110501564 | mcm3ap | coding | downstream | 115860 | 19544358 ~ 19570630 (-) |
| lss | lss | coding | downstream | 142305 | 19530398 ~ 19544185 (-) |
| LOC110501563 | NA | coding | downstream | 160991 | 19523061 ~ 19525499 (-) |
| vil1 | vil1 | coding | upstream | 56551 | 19743720 ~ 19763860 (-) |
| LOC110501577 | LOC106581859 | coding | upstream | 82239 | 19769408 ~ 19787525 (-) |
| LOC118943631 | NA | coding | upstream | 101625 | 19788794 ~ 19789923 (-) |
| agr1 | LOC106581734 | coding | upstream | 508543 | 20195712 ~ 20203864 (-) |
| hdac4 | hdac4 | coding | upstream | 692296 | 20379465 ~ 20660978 (-) |
| G1785861 | NA | non-coding | downstream | 195757 | 19490519 ~ 19490733 (-) |
| G1785857 | NA | non-coding | downstream | 200155 | 19486128 ~ 19486335 (-) |
| G1785752 | ankar | non-coding | downstream | 366651 | 19319492 ~ 19319839 (-) |
| G1785748 | NA | non-coding | downstream | 394902 | 19291367 ~ 19291588 (-) |
| G1785745 | NA | non-coding | downstream | 402111 | 19284031 ~ 19284379 (-) |
| G1786380 | NA | non-coding | upstream | 596 | 19687765 ~ 19688406 (-) |
| G1786566 | NA | non-coding | upstream | 287151 | 19974320 ~ 19974561 (-) |
| G1786579 | NA | non-coding | upstream | 301699 | 19988868 ~ 19989288 (-) |
| G1786646 | NA | non-coding | upstream | 395217 | 20082386 ~ 20082662 (-) |
| G1786654 | LOC107662719 | non-coding | upstream | 403512 | 20090681 ~ 20091112 (-) |
| G1785753 | NA | other | downstream | 364631 | 19321188 ~ 19321859 (-) |
| LOC110501547 | LOC106586143 | other | downstream | 507306 | 19175567 ~ 19179266 (-) |
| G1783895 | LOC106581829 | other | downstream | 1782539 | 17869529 ~ 17903951 (-) |
| LOC110501514 | dapl1 | other | downstream | 2623042 | 17057104 ~ 17063550 (-) |
| G1786832 | LOC100136012 | other | upstream | 658530 | 20345699 ~ 20346014 (-) |
| G1787166 | NA | other | upstream | 703347 | 20390516 ~ 20455983 (-) |
| LOC110501594 | LOC106581696 | other | upstream | 2103587 | 21788428 ~ 21913721 (-) |
| G1789581 | NA | other | upstream | 2730961 | 22418130 ~ 22419498 (-) |
| G1790280 | NA | other | upstream | 3477312 | 23164481 ~ 23169363 (-) |
