G1786002


Basic Information

Item Value
gene id G1786002
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 19765638 ~ 19765914 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2044588
gaccttagagatcccttttatgtctctattttggtctGGTCacggtgtgagttggggtgggcattctatgttttcaaTTTCTTTGtagttggccgggtatggttctcaatcagggacagctgtctatcgttgtctctgattgggaaccatacttaggtacccttttccccacctgtgtttgtgggaggtTGACTTTGTTTAGAGCACTTTGCTTGTGAGCTTCACGGTTAGTTTTTTtagtgtttatagttttgtttggCGTCATTTGGattaataa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2044588 True 277 lncRNA 0.42 1 19765638 19765914

Neighbor

gene id symbol gene type direction distance location
zgc:66484 LOC106581857 coding upstream 21689 19734287 ~ 19743949 (+)
LOC110501573 LOC106586130 coding upstream 38770 19689016 ~ 19726868 (+)
LOC110501572 LOC106581856 coding upstream 79888 19679303 ~ 19686002 (+)
plcd4b plcd4 coding upstream 109880 19630160 ~ 19655758 (+)
LOC110501568 cnot9 coding upstream 137684 19603742 ~ 19627954 (+)
LOC110502116 NA coding downstream 106233 19872147 ~ 19872697 (+)
adarb1b LOC106581860 coding downstream 231925 19997839 ~ 20175660 (+)
traf3ip1 traf3ip1 coding downstream 440488 20206402 ~ 20259273 (+)
asb1 asb1 coding downstream 503732 20269646 ~ 20281952 (+)
LOC110502064 LOC106581735 coding downstream 572214 20338128 ~ 20343956 (+)
G1785961 NA non-coding upstream 91804 19673600 ~ 19673834 (+)
G1785953 NA non-coding upstream 99469 19665910 ~ 19666169 (+)
G1785952 NA non-coding upstream 99978 19665448 ~ 19665660 (+)
G1785951 NA non-coding upstream 100420 19665000 ~ 19665218 (+)
G1786006 NA non-coding downstream 2115 19768029 ~ 19768416 (+)
G1786007 NA non-coding downstream 2559 19768473 ~ 19768832 (+)
G1786167 NA non-coding downstream 230766 19996680 ~ 19997210 (+)
G1786280 NA non-coding downstream 417985 20183899 ~ 20184166 (+)
G1786282 NA non-coding downstream 421669 20187583 ~ 20187801 (+)
G1785947 znf142 other upstream 103712 19661109 ~ 19661926 (+)
ybey ybey other upstream 193199 19570580 ~ 19572946 (+)
LOC110501548 LOC106586143 other upstream 567924 19186076 ~ 19197714 (+)
G1784476 asic4 other upstream 998498 18766319 ~ 18767140 (+)
G1786330 NA other downstream 517267 20283181 ~ 20284571 (+)
G1787719 NA other downstream 1368351 21134265 ~ 21136477 (+)
G1788811 LOC106581691 other downstream 2229450 21995364 ~ 21996093 (+)
G1788815 LOC100136012 other downstream 2232559 21998473 ~ 21999623 (+)

Expression


Co-expression Network